Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2425 ATGTCAACAGCTACAACAGCACAAGTCATAACATGCAAAGGTGCAGTATGGTGGGGAGGAGGAGAAGACGATGTGAGGGTGGAAGACATAGAAGTTGAGCCTCCAAAGGCAACGGAACCTCTTTTTCCACGAGTATTAGGACATGAAGGAGTTGGTGTAGTTGAGAGCATTGGGGAGAATGTGACAAATTTAAGGGTGGGGGATGTTGTGATTCCAACATACATTGGGGAATGCCAAGAATGTGAGAATTGCATTTCAAGTGAGACCAACATGTGCTTGAAATGCCCTCCATCATATACTGGCCTAATGCTTGACAACACATCAAGAATGTCCATAAGAGGCCAGAAAATATTCCAACTCTTTAGTTGCTCCACATGGTGTGAGTATACGGTGACTGAAGCAAATTACCTTCTCAAAGTTGATCCAACCATTGATTTGGCTCATGCTAGCTTCCTCTCTTGTGGATTCTCCACTGGTTTTGGGGCTGCTTGGAAGGAAGCCAATGTTCAACCCGGATCGTCTGTTGCCGTTTTTGGTCTCGGCACCGTCGGATTAGGGGTTATAAATGGAGCCAAAATGGTTGGGGCAAGTAAGATAATTGGGATTGACAAAAATGAAATGAAGAAAGGAAAAGGAGAAGCTTTTGGAATGACAGATTTTATAAATTCAGGGGAATCTGATAAGACAGCTTCAGAGTTGGTCAAGAAATTGAGTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTGCCCCTTTCCTTACTCAAGCCCTCCAGGCCACTAAAATGGGAAAAGGAAAGACAATAGCAATCGGTTCAATGTCTGAAGAATTTGTGAAGATCAACTTTCCTAGCCTTTTGTTTGGGAGAACTCTGAAGGGTTCCGTTTTTGGAGGACTAAAAGTGAAATCTGATCTACCTATCATAGTTGACAAATGTCTCAAAAAGGAATTCCCTCTTGATGAACTTCTTACCCATGAGGTCTCATTGACAGAAATACACAAAACATTTGAGCTATTCAAACAACCAGATTGTGTTAAAGTTGTCATTAAGATATCATAA 1068 0.4213 MSTATTAQVITCKGAVWWGGGEDDVRVEDIEVEPPKATEPLFPRVLGHEGVGVVESIGENVTNLRVGDVVIPTYIGECQECENCISSETNMCLKCPPSYTGLMLDNTSRMSIRGQKIFQLFSCSTWCEYTVTEANYLLKVDPTIDLAHASFLSCGFSTGFGAAWKEANVQPGSSVAVFGLGTVGLGVINGAKMVGASKIIGIDKNEMKKGKGEAFGMTDFINSGESDKTASELVKKLSGGMGVDYSFECTGVAPFLTQALQATKMGKGKTIAIGSMSEEFVKINFPSLLFGRTLKGSVFGGLKVKSDLPIIVDKCLKKEFPLDELLTHEVSLTEIHKTFELFKQPDCVKVVIKIS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2425 355 SUPERFAMILY GroES-like 5 167 IPR011032 -
Bisa05g2425 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 47 61 IPR002328 GO:0008270|GO:0016491
Bisa05g2425 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 144 317 IPR036291 -
Bisa05g2425 355 Gene3D - 36 349 - -
Bisa05g2425 355 Gene3D - 159 297 - -
Bisa05g2425 355 Pfam Alcohol dehydrogenase GroES-like domain 37 140 IPR013154 -
Bisa05g2425 355 PANTHER ALCOHOL DEHYDROGENASE 10 346 - -
Bisa05g2425 355 FunFam S-(hydroxymethyl)glutathione dehydrogenase 159 297 - -
Bisa05g2425 355 SUPERFAMILY GroES-like 305 352 IPR011032 -
Bisa05g2425 355 Pfam Zinc-binding dehydrogenase 183 301 IPR013149 -
Bisa05g2425 355 FunFam alcohol dehydrogenase 1-like isoform X1 23 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2425 Bisa-ChrBisa05 56693871 56700358 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2425 42 326 Monolignol Biosynthesis Gene Families AT1G72680 27.551 2.33e-12 65.5