Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2424 ATGTCAACAGCTACAACACAAGTTATAACGTGTAAAGGTGCAGTGTGGTGGGGAGGAGGAGAAGAGGATGTGAGCGTGGAAGACATAGAAGTTGAGCCTCCAAAGGCAACTGAAGTTCGTGTGAAGATGCTGTGTGCGAGTGTGTGCCACACCGATCTCTCCAACGCCAGAGGACTTCTTGTTCCTCTTTTTCCTCGAGTATTAGGACATGAAGGAGTTGGTGTAGTTGAGAGCATTGGGGAGAAAGTGACAAATTTAAGAGTGGGGGATGTTGTGATTCCAACATACATTGGGGAATGCCAAGAATGTGAGAACTGCATTTCAAGTGAGACCAACATGTGCTTGAATTACCCTCTAACATATAATGGCCTAATGCTTGATAACACATCAAGAATGTCCATAAGAGGCCAGAAAATATTCCAACTCTTTAGTTGCTCCACATGGTGTGAGTATATGGTGACTGAAGCAAATTACCTTGTCAAAGTTGATCCAACCATTGATTTGGCTCATGCTAGCTTCATCTCTTGTGGATTCTCCACTGGATTTGGGGCTGCTTGGAAGGAAGCCAAGGTTCAACCTGGATCATCTGTCTCCGTTTTTGGTCTCGGCACCGTCGGATTAGGGGTTATAAGTGGAGCCAAAATGGTTGGGGCAAGTAAGATAATTGGGATTGACAAAAATGAAATGAAGAAAGGAAAAGGAGAAGCTTTTGGAATGACAGATTTTATAAATTCAGGGGAATCTGAGAAGCCAGCTTCAGAGTTGGTCAAGGAATTGAGTGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACTGGAGTTGCCCCTTTCCTTACTCAAGCACTTCAGGCCACTAAAATGGGAAAAGGAAAGACAATAGCAATCGGTTCAATGTCTGAAGAATTTGTGAAGATCAACTTTCCTAGCCTTTTGTTTGGGAGAACTCTGAAGGGTTCCCTTTTTGGAGGACTAAAAGTGAAATCTGATCTACCTATCATAGTTGACAAGTGCCTCAAAAAGGAATTCCCTCTTGATGAACTTCTTACCCATGAGGTCTCATTAATAGAAATACACAAAACATTTGAGCTATTCAAACAACCAGATTGTGTTAAAGTTGTCATTAGGATATCATAA 1134 0.4233 MSTATTQVITCKGAVWWGGGEEDVSVEDIEVEPPKATEVRVKMLCASVCHTDLSNARGLLVPLFPRVLGHEGVGVVESIGEKVTNLRVGDVVIPTYIGECQECENCISSETNMCLNYPLTYNGLMLDNTSRMSIRGQKIFQLFSCSTWCEYMVTEANYLVKVDPTIDLAHASFISCGFSTGFGAAWKEAKVQPGSSVSVFGLGTVGLGVISGAKMVGASKIIGIDKNEMKKGKGEAFGMTDFINSGESEKPASELVKELSGGMGVDYSFECTGVAPFLTQALQATKMGKGKTIAIGSMSEEFVKINFPSLLFGRTLKGSLFGGLKVKSDLPIIVDKCLKKEFPLDELLTHEVSLIEIHKTFELFKQPDCVKVVIRIS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2424 377 Pfam Zinc-binding dehydrogenase 205 323 IPR013149 -
Bisa05g2424 377 Gene3D - 21 371 - -
Bisa05g2424 377 SMART PKS_ER_names_mod 20 374 IPR020843 GO:0016491
Bisa05g2424 377 CDD liver_alcohol_DH_like 9 375 - -
Bisa05g2424 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 166 339 IPR036291 -
Bisa05g2424 377 SUPERFAMILY GroES-like 327 375 IPR011032 -
Bisa05g2424 377 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Bisa05g2424 377 PANTHER ALCOHOL DEHYDROGENASE 7 368 - -
Bisa05g2424 377 Pfam Alcohol dehydrogenase GroES-like domain 37 162 IPR013154 -
Bisa05g2424 377 FunFam alcohol dehydrogenase 1-like isoform X1 20 180 - -
Bisa05g2424 377 FunFam S-(hydroxymethyl)glutathione dehydrogenase 181 319 - -
Bisa05g2424 377 SUPERFAMILY GroES-like 6 193 IPR011032 -
Bisa05g2424 377 Gene3D - 181 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2424 Bisa-ChrBisa05 56685247 56689910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2424 38 316 Monolignol Biosynthesis Gene Families AT4G37980 27.817 6.06e-16 75.9