Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2421 ATGGGTTATATATGTGACTTTTGTGGGGAACAGAGGTCCATGGTGTACTGCCGTTCTGATGCTGCATGCTTATGTTTGTCTTGTGATCGAAATGTTCATTCTGCTAATGCCCTTTCTAGGCGTCATTCGAGAAATCTTTTATGTGAGAGATGCAATTCACAACCTGCTCTTGTACGGTGTTCTGAAGAAAGGATCACACTATGTCAGAACTGTGATTGGTTGGGTCATGGTGCCTCTACATCTTCATCAACACATAAGAGGCAAACAATCAATTGCTACTCTGGCTGCCCTTCAGCAGAAGAACTTTCTTCTATATGGTCATTTGTCTTAGCTGTCCCTTCTATTGGTGATTCTACTTGTGAGCAGGAACTTGGTTTGATGAGCATTAATGAGAATGGCAACAGAAATGCTTGTGTTCCTCCCGAAAGCCAGAATGTATCTGGTTCAGCTCAAGTAACTGATATACAGGGCATGGATAAGTCTTGGGTAGGAGCCTCTTCAATGCCCGAATCAAGCTCAGAACCTCATATTCTGGACCAGTCAACCAGACCTACTGATGAATGTCTGCCCAAGTTATACTGTCCCAGTGGAAAAGGTCCTGTTCCATGTGAAGATGAAAATGATAACCTGTATGGTGATTTTGATATGGATGAAGTAGATCTGAATCTTGAGAACTACGAGGAACTTTTTGGTATGGCTCTTAGTCATTCTGAAGAGCTTTTTGAAAATGGTGGAATTAATAGCTTGTTTGAGCCAAAGGACATGTCTGCTGGTGATTCCAATTGTCAGGGTGCTGTTGCTGCTGAGGGTTCATCAGCTGGACTGGTCAATGTGGTGCAACCAGCATACAGCAATGCTGCCTCAGCAGATTCCATTTTGAGTACCAAAACTGAACCGGTTCTTTGTTATACGGGTAGGCAAGCCCAATCAAATCTTTCTTTTTCTGGGGTCACAGGGGAAAGTAGTCCTGGCGACTATCAAGACTGTGGAGCTTCTGCAATGCTTCTCATGGGAGAGCCTCCTTGGTGTCCTCCTGAGAATTCCCTGCAATCTGCTAACCGCAGCAATGCTGTCATGCGTTATAAGGAAAAGAAGAAGACACGCATGTTTGAGAAAAAAGTGAGGTATGCCTCTCGCAAGGCAAGGGCCGATGTCCGAAGGCGTGTGAAGGGCCGGTTTGTCAAAGCTGGGGAAGCCTATGATTATGACCCTTTGAGCCCAACCAGGAGCTATTGA 1236 0.4498 MGYICDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRNLLCERCNSQPALVRCSEERITLCQNCDWLGHGASTSSSTHKRQTINCYSGCPSAEELSSIWSFVLAVPSIGDSTCEQELGLMSINENGNRNACVPPESQNVSGSAQVTDIQGMDKSWVGASSMPESSSEPHILDQSTRPTDECLPKLYCPSGKGPVPCEDENDNLYGDFDMDEVDLNLENYEELFGMALSHSEELFENGGINSLFEPKDMSAGDSNCQGAVAAEGSSAGLVNVVQPAYSNAASADSILSTKTEPVLCYTGRQAQSNLSFSGVTGESSPGDYQDCGASAMLLMGEPPWCPPENSLQSANRSNAVMRYKEKKKTRMFEKKVRYASRKARADVRRRVKGRFVKAGEAYDYDPLSPTRSY 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2421 411 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 399 - -
Bisa05g2421 411 Pfam CCT motif 354 396 IPR010402 GO:0005515
Bisa05g2421 411 CDD Bbox1_BBX-like 4 44 - -
Bisa05g2421 411 CDD Bbox1_BBX-like 47 90 - -
Bisa05g2421 411 ProSiteProfiles CCT domain profile. 354 396 IPR010402 GO:0005515
Bisa05g2421 411 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Bisa05g2421 411 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bisa05g2421 411 SMART bboxneu5 48 90 IPR000315 GO:0008270
Bisa05g2421 411 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2421 Bisa-ChrBisa05 56520685 56526640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2421 1 411 C2C2-CO-like Transcription Factor Family AT3G07650 56.776 3.09e-156 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa05g2421 CCT 5.7e-17 CL0281