Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2420 ATGGGACTTTCAAGTCTTCCTGCTCCATCTGAAGGAGTACTGTGTGTGCTTTTGGTGAACACTGCCTTTTCTATATCTATAGTTAAAGGCATTGTTAGAACAATTCTTCACATTGTTGGTATAACTCTCTCATCACCACCACCCGCCCCATCATCATCCCCTTCGGCAGACATCTCTGAAACCCTGCCAGAGCCAATCGAATTCGACCTCTGCTCACCGGAGAGTTACATTGACGAGTTCAGAAGCCGGTTGCCAACACTCCGGTTCGACAGCATATGCAGCTGCAAGCATCCTGAACGCGAACATGAGTGTCCTGTGTGTTTGACCCAATTTGAATCAGATTCTGAGATCAACCGCCTCTCCTGCGGCCATCTCTTCCACAAGGTTTGCTTGGAGAAGTGGCTGGCCTACTGGAACATCACATGCCCACTTTGCAGGACTCCATTGTTGCCTGAAGAAGATATGTCTTCTTGCTTTTGGCTTGTGATGTATTCCTTTCTGGGTGTCTCATCCTGA 516 0.4806 MGLSSLPAPSEGVLCVLLVNTAFSISIVKGIVRTILHIVGITLSSPPPAPSSSPSADISETLPEPIEFDLCSPESYIDEFRSRLPTLRFDSICSCKHPEREHECPVCLTQFESDSEINRLSCGHLFHKVCLEKWLAYWNITCPLCRTPLLPEEDMSSCFWLVMYSFLGVSS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2420 171 PANTHER - 1 157 IPR044249 -
Bisa05g2420 171 SUPERFAMILY RING/U-box 97 152 - -
Bisa05g2420 171 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Bisa05g2420 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 151 IPR013083 -
Bisa05g2420 171 SMART ring_2 104 145 IPR001841 -
Bisa05g2420 171 Pfam Ring finger domain 103 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2420 Bisa-ChrBisa05 56417315 56418121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2420 1 160 C3H Transcription Factor Family AT2G04240 61.963 4.37e-63 190