Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2412 ATGGCGGGAGCTTCAAGAATCCTATACACCACCACGCTCATTCCCAATTTTAATCCGACCCAGAAATCCCATGTGCCTCAGCGTCATCTAACCATTTCACGCAAGCCTCAAATTCATTGTTCAGTTTCTTCTGCAAGCGATGCCACCAAAATCGCCGTGACCCAAACTGTGCCATGGGGCTGTGAGATTGATTCTTTAGAAAACGCATCAGCTTTGGAGAGATGGTTGTCTGAGTCAGGCCTTCCACCCCAGAAGATGGCGATAGAAAGAGTGAATGTAGGGGAGAGGGGACTTGTTGCATTGAAGAATATTAGGAAGGGAGAGAAGTTGCTCTTTGTGCCTCCCTCACTAGTCATCACTGCAGATTCTGAGTGGAGCTGCCCAGAAGCTGGTGAAATTTTGAAAAGGAATTCGGTGCCAGATTGGCCACTGCTTGCAACTTACCTCATTAGTGAAGCAAGCGTCAAGAAATCTTCAAGATGGAGCAGTTATGTGTCAGCCTTACCCCGGCAGCCCTATTCACTTCTTTACTGGTCACGAGCAGAACTAGATCGCTATTTGGAAGCTTCACAGATTAGGGAGAGAGCAATTGAAAGGATTAATAATGTTATTGGAACATACAATGACTTGAGGCTCAGAATATTTTCCAAGTATCCTAGTTTATTCCCCGAAGAGGTGTTCAACATTGAGACCTTCAAATGGTCATTTGGTATTCTTTTCTCTCGCTTGGTTCGGTTGCCCTCGATGGATGGAAAGTTTGCATTGGTTCCTTGGGCAGATATGCTGAACCATAGTTGTGATGTGGAAACATTTTTGGATTATGATAAGTCATCAAAGGGAGTTGTCTTCACCACAGATCGTCCCTACCAACCAGGTGAGCAGGTGTTCATTTCATATGGCAAGAAATCTAATGGAGAGCTTTTGCTATCTTATGGATTTGTTCCAAAGGAAGGCACTAATCCTAGTGATTCAGTTGAGTTGTCACTATCACTCAAGAAATCTGATGGATGCTATGATGAGAAGTTACAACTCTTGACGAAATACGGACTGTCAGCATCACAAGGTTTCCCTGTTAAAATTACTGGTTGGCCTTTGGAATTAATGGCATATGCTTATTTAGCTGTGAGTCCTTCAAGCATGAGGGGGAAATTTGAAGAGATGGCAGCAGCAGCATCGAATAAAGCAACCTCCAAGAAGGATTTGAGATACCCTGAAATAGAAGAGCAAGCATTACAATTTATACTTGACAGCTGCGAATCCAGCGTATCAAAGTACAAGAAGTTTTTACAGGAAAGTGGATCACTGGATTTGGATGTGACTTCTCCAAAACAACTCAACCGAAGACTCTTTCTGAAACAACTAGCTGTGGACTTGTGTACCAGCGAGCAAAGAATTCTATTTCGAGCTCAATATATACTGCGGAGAAGACTGAGGGATATGAGGACTGGCGAATTAAGAGCCCTAAAAATCTTCGATGGGTTCAGGAATCTTTTCCAGTGA 1500 0.434 MAGASRILYTTTLIPNFNPTQKSHVPQRHLTISRKPQIHCSVSSASDATKIAVTQTVPWGCEIDSLENASALERWLSESGLPPQKMAIERVNVGERGLVALKNIRKGEKLLFVPPSLVITADSEWSCPEAGEILKRNSVPDWPLLATYLISEASVKKSSRWSSYVSALPRQPYSLLYWSRAELDRYLEASQIRERAIERINNVIGTYNDLRLRIFSKYPSLFPEEVFNIETFKWSFGILFSRLVRLPSMDGKFALVPWADMLNHSCDVETFLDYDKSSKGVVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPKEGTNPSDSVELSLSLKKSDGCYDEKLQLLTKYGLSASQGFPVKITGWPLELMAYAYLAVSPSSMRGKFEEMAAAASNKATSKKDLRYPEIEEQALQFILDSCESSVSKYKKFLQESGSLDLDVTSPKQLNRRLFLKQLAVDLCTSEQRILFRAQYILRRRLRDMRTGELRALKIFDGFRNLFQ 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2412 499 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 67 435 - -
Bisa05g2412 499 Pfam SET domain 96 300 IPR001214 GO:0005515
Bisa05g2412 499 Pfam Rubisco LSMT substrate-binding 333 466 IPR015353 -
Bisa05g2412 499 ProSiteProfiles SET domain profile. 84 300 IPR001214 GO:0005515
Bisa05g2412 499 PIRSF RMT_SET 3 496 IPR011192 GO:0009507|GO:0030785
Bisa05g2412 499 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 330 495 IPR036464 -
Bisa05g2412 499 SMART set_7 84 306 IPR001214 GO:0005515
Bisa05g2412 499 CDD SET_RBCMT 83 314 IPR044431 GO:0016279|GO:0018022
Bisa05g2412 499 FunFam Rubisco methyltransferase family protein 319 482 - -
Bisa05g2412 499 Gene3D set domain protein methyltransferase, domain 1 21 313 - -
Bisa05g2412 499 Gene3D - 319 488 IPR036464 -
Bisa05g2412 499 SUPERFAMILY SET domain 68 317 IPR046341 -
Bisa05g2412 499 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 53 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2412 Bisa-ChrBisa05 56188214 56200733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2412 71 269 NAC Transcription Factor Family AT3G56570 22.549 1.57e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa05g2412 SET 6.4e-17 No_clan