Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2392 ATGGCGGATTCGGACAACGAATCGGGAGGGTACAACAACAGCGGCAACGCCAATAACGAGGTGTCGGCGAAGGAACAAGACAGGTTCTTGCCGATAGCGAACGTCAGCAGGATAATGAAGAAGGCGTTGCCGGCGAACGCCAAGATCTCGAAGGACGCGAAGGAGACGGTGCAGGAGTGCGTGTCGGAGTTCATAAGCTTCGTCACGGGGGAGGCGTCGGATAAGTGCCAGAGAGAGAAGAGGAAGACTATCAACGGCGACGATTTGCTGTGGGCCATGACTACTTTAGGGTTCGAGGATTATGTGGAACCTCTCAAGATTTACCTTCAGAAGTATCGGGAGATGGAAGGGGAGAAGACCTCCGTGGGGAGACTCGGCGAGAAGGACGGTGGCTCTTCCGGCAGCGGCGGCGGCGGCGGAAGTGGTGTTATTGGGTTTAACGGAGTTGAGGGCATGTACGGTGGGATGATGCCAGGGCATCATCAGGGACAGATTTACGGTTCTGGTGGGTTTAACCAAAGCAGTGGTGGTGGAGGTTCCAATGTGAGATCTAGGTAG 558 0.552 MADSDNESGGYNNSGNANNEVSAKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQKYREMEGEKTSVGRLGEKDGGSSGSGGGGGSGVIGFNGVEGMYGGMMPGHHQGQIYGSGGFNQSSGGGGSNVRSR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2392 185 MobiDBLite consensus disorder prediction 1 26 - -
Bisa05g2392 185 MobiDBLite consensus disorder prediction 119 141 - -
Bisa05g2392 185 MobiDBLite consensus disorder prediction 166 185 - -
Bisa05g2392 185 MobiDBLite consensus disorder prediction 163 185 - -
Bisa05g2392 185 Gene3D Histone, subunit A 16 134 IPR009072 GO:0046982
Bisa05g2392 185 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Bisa05g2392 185 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Bisa05g2392 185 PRINTS CCAAT-binding transcription factor subunit A signature 95 113 - -
Bisa05g2392 185 FunFam Nuclear transcription factor Y subunit B-3 18 137 - -
Bisa05g2392 185 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 5 140 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa05g2392 185 MobiDBLite consensus disorder prediction 1 23 - -
Bisa05g2392 185 SUPERFAMILY Histone-fold 26 124 IPR009072 GO:0046982
Bisa05g2392 185 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 29 93 IPR003958 -
Bisa05g2392 185 ProSitePatterns NF-YB/HAP3 subunit signature. 60 76 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2392 Bisa-ChrBisa05 55718177 55718734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2392 1 129 CCAAT-HAP3 Transcription Factor Family AT4G14540 84.615 1.10e-77 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa05g2392 CBFD_NFYB_HMF 1.7e-27 CL0012