Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2388 ATGAAACCATCAAGTAACATCTGGATTCGACGTCAACAATGCCCATGTGGAGATTGGAAGTGTTTTATTAAGTATGATGGAGATGATCAGATATCAGTAAGATCTCAGCCTATAAAGAATGAGACAGTGTCTTCATCATCATCAGAGGCTGTGTTCACTCCTTATGTGGGTCAAATATTCAAAAGTGATAATGATGCATTTGAATACTACAGCAGTTTTGCCCGGAAGAATGGATTTTCGATCAGAAAAGCACGCTCAACGGAAAGTCAAAATTTAGGAGTATATAGAAGAGATTTTGTTTGCTACAGGTCAGGATTCAATCAACCAAGAAAAAAGGCTAATGTTGAACATCACAGGGAGCGAAAATCTGTACGATGTGGATGTGATGCAAAATTGTACTTGACGAAGGAAATTGTTGATGGTGTTACTCAATGGTATGTGTCTCAATTTAGTAATATCCATAACCATGAGTTGTTGGAAGATGACCAAGTACGTCTTCTACCTGCATATCGAAAAATACAAGAGGCTGATCAAGAACGCATTCTTCTACTTTCCAAGGCTGGGTTCCCTGTGAACCGTATCGTGAAGGTGTTAGAGCTGGAAAAAGGAGTTCAACCTGGACAGCTACCTTTCATAGAAAAGGATGTTAGAAATTTTGTTCGGACTTGCAAGAAAGCAGTTCAAGAAAACGATGCTTTACTGACTGAGAAAAGGGAGAATGATATGAATGAACTTGTGGAGACCTGTAAGGCAGTGATAGACAAGGATCCCAATTTTGTTTTTGATTACACAACTGATGAAACTGGAAAAGTTGAAAATATAGCTTGGTCATACAGTGAATCTATTCGAGCATATTCTGTTTTTGGTGATGTAGTTACTTTGGACACCACGTACCGTTCTGTCACATATGGATTGCTTCTTGGAGTGTGGTTTGGTATAGATAATAATGGAAATGCAGTATTATTCGGGTGTGTGTTGTTACAAGATGAGAGTTCCTATTCATTTGCATGGGCTTTACAGACATTTGTACGATTTATGAGAGGGAGACATCCGCAGACAATTTTAACTGATATAGATCCAGGTCTGGGAGATGCTATTGCCAAGGAGTTGTCTGAAACGAAACATGTTATATGCACGTGGCATATTCTATCAAAATTATCAAATTGGTTCTCTTTACCCCTGGGATCACAGTATGAAGATTTTAGGGTAGAGTTTGATTTATTGTGTCACCTGGAGAACATAGAAAACTTTGAACATCAATGGGATCTTTTTGTAGCTCGATTTGGACTTGTTTCTGACAAGCATATAGCTTTGCTATTCTCGTTTCGAATGTCTTGGCCGCTATGCTATGTTAGAAGTTATTTCGTAGCTCGGTCATTGACGGCCGAGTTTTCACAATCTTTGGATTCAGTCTTGGAAAGAATTTTAGATTCCCAAACATGTCTACAAGTATTCTTCGAGCAGGTAGGTTTCGCTGCCAACTCGTCAATGTTAAAAAGAGAAGGGATGCATTACATGGGTATAAAGACATGCATGCCCATGGAAGAACATGCAAGGAGTGTTCTTACACCATATGCTTTCAATATCGTCCAACGTGAAATTGTGCTGTCATTGCAATGCGCGACAACAGAACTGACCAATGGATCATACCTTGTTCATCACTACAAGAAAATGGACGATGAGCGTCTTGTCATTTGGCCACCGAATGACGAGCAAATTCAATGTTCTTGTAAGGAATTTGAACATTCAGGAATATTGTGCCGGCATTCGATTCGTGTACTTACAGTGAAGAACTGCTTTGAACTGCCTATGAAATATTTACTTCCTCGCTGGCGACAACAAAGTCCGATGGCTCCTATTGACGAACAAAACCCTCAGAGCGGTGATGAGTGTGCTCAAGCCTTCCATTCTTTGGCAGCCAATTTACTAACAGAATCATCAATCTCCAAGGAACGATTTAATTATGTTCATAGAGAACTCACAGGGATTCTTGAGCATGTTAAAAATATGGAAGTTATTGATGAATTTGCTATAAATGTGGTAGCTAATCCTATCATTGAATCCTAG 2067 0.3928 MKPSSNIWIRRQQCPCGDWKCFIKYDGDDQISVRSQPIKNETVSSSSSEAVFTPYVGQIFKSDNDAFEYYSSFARKNGFSIRKARSTESQNLGVYRRDFVCYRSGFNQPRKKANVEHHRERKSVRCGCDAKLYLTKEIVDGVTQWYVSQFSNIHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKAVQENDALLTEKRENDMNELVETCKAVIDKDPNFVFDYTTDETGKVENIAWSYSESIRAYSVFGDVVTLDTTYRSVTYGLLLGVWFGIDNNGNAVLFGCVLLQDESSYSFAWALQTFVRFMRGRHPQTILTDIDPGLGDAIAKELSETKHVICTWHILSKLSNWFSLPLGSQYEDFRVEFDLLCHLENIENFEHQWDLFVARFGLVSDKHIALLFSFRMSWPLCYVRSYFVARSLTAEFSQSLDSVLERILDSQTCLQVFFEQVGFAANSSMLKREGMHYMGIKTCMPMEEHARSVLTPYAFNIVQREIVLSLQCATTELTNGSYLVHHYKKMDDERLVIWPPNDEQIQCSCKEFEHSGILCRHSIRVLTVKNCFELPMKYLLPRWRQQSPMAPIDEQNPQSGDECAQAFHSLAANLLTESSISKERFNYVHRELTGILEHVKNMEVIDEFAINVVANPIIES 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2388 688 ProSiteProfiles Zinc finger SWIM-type profile. 550 598 IPR007527 GO:0008270
Bisa05g2388 688 SMART 26again6 573 600 IPR006564 GO:0008270
Bisa05g2388 688 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 669 IPR031052 GO:0006355
Bisa05g2388 688 Pfam MULE transposase domain 291 384 IPR018289 -
Bisa05g2388 688 Pfam FAR1 DNA-binding domain 68 159 IPR004330 -
Bisa05g2388 688 Pfam SWIM zinc finger 568 597 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2388 Bisa-ChrBisa05 55641188 55643617 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa05g2388 MULE 1.6e-20 CL0219