Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2378 ATGTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCATCATCATCTTCTCATCCTCCTTCTTCCTCCTCCATTCCCCATGATCCTTCCTCCTCTCGCCCTCGCCGTGCCATGAACGACGTCTTGACCGAGGAAATCCTCGACATCGCCTTCCTAGTCGCCAATGATGCTGCTCGCGCACATGGCCGCCTCTCTGCTGCTCCTGCTCTCGCCAATGTCTTTCGGGTTTGTTCTACGTGGCATGCTGTGTCCCGGTCAGATCATCTGTGGGAGCGGCTCACCAGAACCATCTGGCTCCGCGCCAATCAGACCCGTCCCGCGTGGCACGACGAGTTCATTCACTGTCATCAATTGGCCAGGAATTTCATCACAGGCCGATACAACTATGCCCCCCTGCACTTCGACCCATCCGACGTGGACGACGGCGGCGACCGCAGCACCGTCATCTGCCGCTGCCTCGCCCTCTCCGACGTCCACCTCGCCTGCGGCTTCGCCGATGGCACCGTCCGCCTCTTCGACCTCGAGACCCGAGTCCACGTCAGCACGTTCCGGTCCCATCAGGCCGGCAGATTCGGCCCCTTCTCGAGATCCGTGTGCGGCATCCTGATCACCGACTCGAGGCTTGTGTTCGCCACGCTGGACGGGGACATCTACGTGGCACAACTCGACGGGCCCGCCAATCAGACGCGCAGGGCCCGCGTCGGTGACGTAGTCAGCAGCGGAGTCCTCGTCGAGTTCGCCGGGTCTCGCAGATGGTGGGTCGGGCTCTTCGCCGGAGTGCCGGGACGGGCGTTTCAGATCTGGGACGCGGACAGTGAAGAGCTCGTGTTTATCGGCGGATCCTTGACCGACCCGGAAACTGTTATGGGTTGGCACATGTTGACCGAGCTGACCGAACCGGTGGGCCGGGTTCGGGTCACGAACCGGGAACTTGCGGTGGCATGCACGAGCTCGCAACTCATAGTGTTCGACTTGAGCAACCCGGAGATTTTATTGCAAGTGCTCTGGTCCACTGCGGGCGGCTTCATCGTGACGTCCATGGACGTGAGCCAGGAGGCGTTCTTTATCGTGGAAAGGAACGGTGACGCTAAGGTGCGCCGTGCGAGCACGTTGGAGCAGCTGTGCGAGTTCCAAGTGAGGGTGAGGGGTAATTTAATGGGGTGTAGGAACATGGGGTGCGCGCTAACGTGCGCCAGGGGCTGGGTGACCGTGTGGGATGTGGAACTCCCGGTGGGACGACGCTGTGTGGTTCTCGGGGAAAGGGTGGGAGAGGGAAATGCCATGGTTTGCAACGAGAGACACGTGGCGTTGTCATGTAGTGACGCGTCGATACACCTGTGGGATTTTGATGTACAGTAG 1365 0.6051 MSSSSSSSSSSSSSSSSSSHPPSSSSIPHDPSSSRPRRAMNDVLTEEILDIAFLVANDAARAHGRLSAAPALANVFRVCSTWHAVSRSDHLWERLTRTIWLRANQTRPAWHDEFIHCHQLARNFITGRYNYAPLHFDPSDVDDGGDRSTVICRCLALSDVHLACGFADGTVRLFDLETRVHVSTFRSHQAGRFGPFSRSVCGILITDSRLVFATLDGDIYVAQLDGPANQTRRARVGDVVSSGVLVEFAGSRRWWVGLFAGVPGRAFQIWDADSEELVFIGGSLTDPETVMGWHMLTELTEPVGRVRVTNRELAVACTSSQLIVFDLSNPEILLQVLWSTAGGFIVTSMDVSQEAFFIVERNGDAKVRRASTLEQLCEFQVRVRGNLMGCRNMGCALTCARGWVTVWDVELPVGRRCVVLGERVGEGNAMVCNERHVALSCSDASIHLWDFDVQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2378 454 MobiDBLite consensus disorder prediction 1 37 - -
Bisa05g2378 454 SUPERFAMILY WD40 repeat-like 152 450 IPR036322 GO:0005515
Bisa05g2378 454 PANTHER WD40 REPEAT PROTEIN 12, 37 7 451 - -
Bisa05g2378 454 Gene3D - 143 244 IPR015943 GO:0005515
Bisa05g2378 454 MobiDBLite consensus disorder prediction 1 32 - -
Bisa05g2378 454 SUPERFAMILY F-box domain 70 125 IPR036047 GO:0005515
Bisa05g2378 454 Gene3D - 249 454 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2378 Bisa-ChrBisa05 55477969 55484334 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Bisa05g2378 None None None