Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2308 ATGAAATTGGAAGAACTCCAGCTCGAGCTCCATCACCCGAAGCTGCTGCAGCGGCAGAGCAAGGAGAAGATCCAACTTGATGTTGCCGACCTATCGCCGCCCATCGCTGCCGATGATGATGATGGTGGTTGCGAGAAGGTCGTCGATGGTGACGGTGAGGATATCTTCATCCAGCCTCTTAATTTTGCTATGGTAGATAACGGCATTTTCCGGTCCGGCTTCCCTGAGCCCGCCAACTTCTCCTTCCTCGAATCTCTCGGTCTCCGCTCCATCGTATATCTATGCACTGAACCGTACCCGGGGGTCAACGTGGAGTTCTTGAAGTCAAATGGGATCAAGCTTTATCAGTTTGGGATTGAGGGTCACAAGGAGCCTTTTGTAAACATCCCAGAGGACACAATCTGTCAAGCACTAAGGGTTTTACTTGATGTCAGGAACCACCCAGTTTTAATTCACTGTAAAAGGGGGAAGCATCGGACAGGATGCCTCGTAGGCTGCTTCAGAAAATTGCAGAAATGGTGCTTGTCTTCTGTGTTTGATGAGTACCAGCGTTTTGCAGCAGCCAAGGCAAGAGTTTCGGATCAGAGATTTATGGAATTGTTTGATATTTCCAGCTTGGCACATTTGCCCATGTCGTTTTCATTTTCGAAGAGGTGA 657 0.4871 MKLEELQLELHHPKLLQRQSKEKIQLDVADLSPPIAADDDDGGCEKVVDGDGEDIFIQPLNFAMVDNGIFRSGFPEPANFSFLESLGLRSIVYLCTEPYPGVNVEFLKSNGIKLYQFGIEGHKEPFVNIPEDTICQALRVLLDVRNHPVLIHCKRGKHRTGCLVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFMELFDISSLAHLPMSFSFSKR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2308 218 CDD PFA-DSP_Siw14 56 202 - -
Bisa05g2308 218 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 57 203 IPR029021 -
Bisa05g2308 218 ProSiteProfiles Dual specificity protein phosphatase domain profile. 61 215 IPR020422 GO:0006470|GO:0008138
Bisa05g2308 218 Gene3D Protein tyrosine phosphatase superfamily 56 205 IPR029021 -
Bisa05g2308 218 FunFam probable tyrosine-protein phosphatase At1g05000 55 205 - -
Bisa05g2308 218 ProSitePatterns Tyrosine specific protein phosphatases active site. 151 161 IPR016130 GO:0016311|GO:0016791
Bisa05g2308 218 PANTHER TYROSINE-PROTEIN PHOSPHATASE 48 207 - -
Bisa05g2308 218 PRINTS Plant and fungal dual specificity phosphatase signature 112 126 IPR020428 GO:0016791
Bisa05g2308 218 PRINTS Plant and fungal dual specificity phosphatase signature 93 106 IPR020428 GO:0016791
Bisa05g2308 218 PRINTS Plant and fungal dual specificity phosphatase signature 129 143 IPR020428 GO:0016791
Bisa05g2308 218 PRINTS Plant and fungal dual specificity phosphatase signature 56 73 IPR020428 GO:0016791
Bisa05g2308 218 Pfam Tyrosine phosphatase family 57 207 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2308 Bisa-ChrBisa05 53130405 53141003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2308 52 218 Protein tyrosine phosphatase (PTP) family AT4G03960 76.048 9.57e-95 273