Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2288 ATGGCAGAGATTGCAATATCTGTCATTGCCAAACTCACAGAATATTTGGTGGATCCATTGGGACGCCAAGGACAATATTTGTTCTGTGTAGCTCAAATCACAAAAACTCTTGAAAATGAGAAACAAAAGCTGGCCCATGCTCAAGATGGAGTACAAAAACGTGTTGAAGAAGCGCTTAAGAGAACTGAAAAAGTTGATGATGTTGTTGAGAAGTGGTTGGACAAAGTGAAAAATCATATAGATGAGGTGGTAAAATTGGAACAACTAATGAATATAGACACGAGTTGTTGTCAAGGGAGGTGTCCTAACTGGAAGAGGTATCGCCTATGTAGACAAATGGCAAAGAAGATAGACACAACAAAACAGCTACTCATTGCAAGGAGTGATTTCAAGCAGTTTTCCTTCCCTGCTGCACTTCCAGATATAGAGTATTTTTCTTCTGGAAATTTTGTGTGTTTCCAATCTACAAAGTTGGCTTTTGATCAACTTTTGGAGGCACTACAAGATAACAGTAGCTATATGATTGGATTGTATGGAATGGGGGGCTCTGGTAAAACAACATTGGTCAAAGAAGTGGGCAAGAAAGCAAAGGAATTAAAGCTTTTTGATCGCGTTTTATTTGCTACAGTGTCCCAAACTCTAGATGTTAGAAAGATTCAAGGCGAAATTGCAGATATGTTAGGTTTGAAATTAGATGAAGAAACTGAACCAGGAAGAGCAAGGCGTTTGTCAGTGAGGTTTAATAATGGGGAAAGGATTCTCATAATCTTAGATGATGTATGGGCAAAGATCAAACTAGAGGATATAGGGATTCCTTTTGAAGATTATCATGCAGGTTGCAAGCTCCTTCTGACTACTCGACGTCAACAAGTATGCATTATCATGGATTGCAAAAGAAAGATTCCTCTATATCTCTTATCTGAAGAGGAATCCTTGACATTGCTCCAAAAACATGTAGGCATTTGCGACAACTCTGTAAATGGTGTGGTACAAGAAGTTGTGAGGGAATGTAAAGGACTTCCTATTGCAATTGAAGCTGTAGGAAACTCTTTAAAAGGAAAGTCTATTGAAGAATGGAAGGTGGCACTAAGAAGATTGAGGAATTCAAAACCAATCAATGTGGAAGAAGGAGTGAGAGATGCTTTCACTTGTCTCCGATTGAGCTATGATTATTTGAGAAGCAAGGAAGCCAAGTCACTCTTCTTGTTGTGCTGCATGTTTCCAGAAGATCATGATATTTTTATTGAAGATTTGTTCAAGATTGGTGTAGGGTTAGGCCTATGCAAGGAAATGGACTCACTTGAAGCATCAAGAGATGAAATGAATGTGTGTATAAATAATCTCATTGATTCTTGTTTGCTAATGCATTCTGAGGACAAGAAAAACCACTTAAGAATGCATGACATGATTCGCGATGTAGCTTTGTGGATAGCATCCCAAGAAAATCATACTATTGTGGTAAATCTTATGAAAGATTTGAATGCTTTAGCAGATGATAGTGCAAAAAAAGATTATTATGCATTCAGTTCTTGGAGCAATGAAATACGTCACATTCCTGAAAATTTAGATGCTCCGAAGCTCGAGATTTTGCTGCTAAAAACTATGAAGTCATGTGAATTATCAAAAGCATCTTTTAAAAGTATGGAAGCACTCAAGGTTAACCAGTTGTGTAGAGATGCACAACCTCTGCAGACATTTCTGAAATTGGAGAAACTTGAGGTCTCATCAAACAGAGCTTCCTATGAAAGTTCTCCACAACATAGAATCCAGTTTGAGGAGGTTTTTAGACAAAAGAACGAAGATTTCACCCTTAGTGGAGAAGAAATTGCACTTCCAAAGCTTAGCGAGATTAAGCTTGAAAATTTGCATGAAATTGTTGACATATGCCAGCAATTCAAGTTACATGCAGTGAATCTTCACAAGGTCACCATAAATGACTGCCCCAAATTTTCTGCTGTTTATGGAGCAGCGCAAACTATTCCCCTTCGTCAAAGAACAGAGGAATCATGGGTGGTTGGGACGAGTCACAGCCAATGGAATAGAGAGGATTCAGCTCCATTTCCAGCAATTTTGAATGTGAAAGATCCTGATATTCAGAACTGTGAAGCAGTAAAAAAATTTCATATTCTTCTCACCAAAGAGGTAAAGAATGCATTCCATTTTGTTAATACATGGGGCCTCGTTAAGGACCAACCAAGGCTCGTGGACTTAACATTAGAATGCCTGAGTGAAGGAAGCAGTGGGAATGAAGAAACCATGGTTCCACAGGGACCAGGGCCTCTTGGAAAGGATGGAAACCAAATGTCTGATGTAGACCCAACTTTTGTCCGACCAGCCATTTTCAATGTACAGGGAGAAGAGGAAGAATTAAAGAGATTCCCTTTCAAAGAAACACACAGGAACAATGGCCGCATGTAA 2418 0.3892 MAEIAISVIAKLTEYLVDPLGRQGQYLFCVAQITKTLENEKQKLAHAQDGVQKRVEEALKRTEKVDDVVEKWLDKVKNHIDEVVKLEQLMNIDTSCCQGRCPNWKRYRLCRQMAKKIDTTKQLLIARSDFKQFSFPAALPDIEYFSSGNFVCFQSTKLAFDQLLEALQDNSSYMIGLYGMGGSGKTTLVKEVGKKAKELKLFDRVLFATVSQTLDVRKIQGEIADMLGLKLDEETEPGRARRLSVRFNNGERILIILDDVWAKIKLEDIGIPFEDYHAGCKLLLTTRRQQVCIIMDCKRKIPLYLLSEEESLTLLQKHVGICDNSVNGVVQEVVRECKGLPIAIEAVGNSLKGKSIEEWKVALRRLRNSKPINVEEGVRDAFTCLRLSYDYLRSKEAKSLFLLCCMFPEDHDIFIEDLFKIGVGLGLCKEMDSLEASRDEMNVCINNLIDSCLLMHSEDKKNHLRMHDMIRDVALWIASQENHTIVVNLMKDLNALADDSAKKDYYAFSSWSNEIRHIPENLDAPKLEILLLKTMKSCELSKASFKSMEALKVNQLCRDAQPLQTFLKLEKLEVSSNRASYESSPQHRIQFEEVFRQKNEDFTLSGEEIALPKLSEIKLENLHEIVDICQQFKLHAVNLHKVTINDCPKFSAVYGAAQTIPLRQRTEESWVVGTSHSQWNREDSAPFPAILNVKDPDIQNCEAVKKFHILLTKEVKNAFHFVNTWGLVKDQPRLVDLTLECLSEGSSGNEETMVPQGPGPLGKDGNQMSDVDPTFVRPAIFNVQGEEEELKRFPFKETHRNNGRM 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2288 805 Coils Coil 69 89 - -
Bisa05g2288 805 PRINTS Disease resistance protein signature 247 261 - -
Bisa05g2288 805 PRINTS Disease resistance protein signature 174 189 - -
Bisa05g2288 805 PRINTS Disease resistance protein signature 337 351 - -
Bisa05g2288 805 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 572 - -
Bisa05g2288 805 Pfam NB-ARC domain 161 389 IPR002182 GO:0043531
Bisa05g2288 805 FunFam Probable disease resistance protein At1g61300 148 300 - -
Bisa05g2288 805 Gene3D - 146 301 IPR027417 -
Bisa05g2288 805 Gene3D - 305 388 IPR042197 -
Bisa05g2288 805 Gene3D - 389 475 IPR036388 -
Bisa05g2288 805 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 404 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2288 Bisa-ChrBisa05 52348705 52360656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2288 175 481 WRKY Transcription Factor Family AT5G45050 24.444 2.12e-12 69.3