Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2250 ATGAAAGAAAGGCATCGAGATAGCGAGAGAGGAGAGAGGGAGACAACAAAATTGCTGAGAGAAAGGAAGACAAAGATGAACAAAGCAGAAGAAGAAGGAGGAGTCGAGACAACGAGAGAGAAGATGAAATTGCAGAGAGCAAGAGAGACGAAGGCAAACATAGCAGAAGATGAAGGAGGAAAATATACGAAATCTGTAAATTCCCTTTCTTCGTCGACACGAAGTCGTCATCAACACCAGCACGCACGCATAGATCCTGAGAGCCAACGAACACAGAGAAACAGAGACATGGATTTTGAGCTGCGAAGAGCGAGAGAGAAGCTAGAGAAAGAGCAGAAGGAGAAGAAGGAGAAGGCCAGGCTGAGATTGGAGAAGGAAAAGAAGGCTAAACAAGAGGCTAAGAACCGAAGGGAAGCCATTGAAGCCGCTCAAAGATCTCGCCGTATCGATGCAGCCGAAGCCCAACTTAAGGCTGATGAACATATGCAAGAAAGCTTACTTGCGGGAAGAGGAATTGCGTTTTATCGTATATTAGAAGCTGTACCTTATCAAGGAAATGGTGATAAGATCAAACTGCCACCTTCATGCTTCACAGAATTGTCTGATCAGGGTGCCCTTGATAAGGGACCAATGTACTTTCAGTTGTCTATAGTTCATGATGAGGGTTCTTCAGGCATGAAAACTACTGATAAAGATAAGCAGGGGACCACCCATTCAGGGGTTTTAGAATTCACTGCTGATGAAGGTTCAGTAGGTCTTCCTCCTCATGCATGGAATAATTTGTTTTCTGAACTCACTCCGAAGTCTCCGTTAGTGGAAGTCCGCTATGCTTGGCTTCCAAAAGGGACTTATGCAAAACTTCAACCTGAAAGGGTAGGATTTTCTGATCTTCCAAACCATAAGGCTATCCTTGAAACAAGTCTTCGGCAGCATGCCACTCTTTCTCAAGGTGATATTTTAACAGTCAACTACGGAGAACTTGCTTACAGATTGAGGGTGCTTGAATTAAAACCTTCTTCTAGTGTATCTGTCTTAGAAACAGATATTGAAGTTGACATTGTTGATCCTGATACAGCCTTAGAAAAGACAGATCAGCATGTCTTAATCCCGCTTGAATTTGGAATGTCACAATCTGGAATGGTAGAAGAAGGAAATTTTGTGTACTACAAATTCTCAATAGACCATGGCACCTGGGAGAAAATTGTTGCTGAGAATTCCAGTATAGAGGTAAAATTAGAAGCTGAGACAAACGGGGGAGATACTGATCTTTTCATATCCAAACATCCTCTCATATTTCCTACACGGCATCAGCATGAGTGGTCTACCCATGATATTGGCTCAAAGGCTTTGATTCTTAACTCTAAAGATAAAAACCTTGGGGCTGGAACTTACAGCATTGGAGTATTTGGCTTTAAGGGAACAACCAAATACAAAATTTCAGTAGCGACTCGGGAAAAATCCAACCAAAAACTGGGTCAACATGCATCATCTTCTGTGTCACATATGGAGATGGATACTGAACAGTGCGGCAATTGCAAGCATTACATACCCAGTAGGACTATTGCATTGCATGAAGCTTACTGTCGCAGACATAATTTTATTTGTCAACATGCTGGTTGTGGAGTGGTTCTTAGGATTGAGGAGTCCAACAACCACATTCACTGTGACAGGTGTGGTCAATCATTCCAGCAGGGAGAATTGGAAAAACACATGAAAGTTTTCCACGAGCCTCTCAATTGTCCTTGTGGTATAGTCCTTGAAAAAGAACAAATGGTTCAACACCAAATTTCAGATTGTCCCTTGCGTCTAATTACATGCCGCTTTTGCGGTGATATGGTTCAAGCCGGAAGTTCTGCAGCTGACATCCGAGACAAGTTAAGAGGGTTAACTGAGCACGAGAGTGTTTGCGGGTCTAGGACAGCCCCATGCGATTCGTGTGGTCGTGCAGTGATGTTGAAGGACATGGACATACACCAGATTGCTGTTCATCAAAGAAGCTGA 2001 0.4313 MKERHRDSERGERETTKLLRERKTKMNKAEEEGGVETTREKMKLQRARETKANIAEDEGGKYTKSVNSLSSSTRSRHQHQHARIDPESQRTQRNRDMDFELRRAREKLEKEQKEKKEKARLRLEKEKKAKQEAKNRREAIEAAQRSRRIDAAEAQLKADEHMQESLLAGRGIAFYRILEAVPYQGNGDKIKLPPSCFTELSDQGALDKGPMYFQLSIVHDEGSSGMKTTDKDKQGTTHSGVLEFTADEGSVGLPPHAWNNLFSELTPKSPLVEVRYAWLPKGTYAKLQPERVGFSDLPNHKAILETSLRQHATLSQGDILTVNYGELAYRLRVLELKPSSSVSVLETDIEVDIVDPDTALEKTDQHVLIPLEFGMSQSGMVEEGNFVYYKFSIDHGTWEKIVAENSSIEVKLEAETNGGDTDLFISKHPLIFPTRHQHEWSTHDIGSKALILNSKDKNLGAGTYSIGVFGFKGTTKYKISVATREKSNQKLGQHASSSVSHMEMDTEQCGNCKHYIPSRTIALHEAYCRRHNFICQHAGCGVVLRIEESNNHIHCDRCGQSFQQGELEKHMKVFHEPLNCPCGIVLEKEQMVQHQISDCPLRLITCRFCGDMVQAGSSAADIRDKLRGLTEHESVCGSRTAPCDSCGRAVMLKDMDIHQIAVHQRS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2250 666 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 118 612 IPR004854 GO:0006511
Bisa05g2250 666 MobiDBLite consensus disorder prediction 1 58 - -
Bisa05g2250 666 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 574 624 IPR013083 -
Bisa05g2250 666 MobiDBLite consensus disorder prediction 1 97 - -
Bisa05g2250 666 Gene3D - 375 488 - -
Bisa05g2250 666 Gene3D - 281 354 - -
Bisa05g2250 666 Coils Coil 94 146 - -
Bisa05g2250 666 Gene3D - 171 279 IPR042299 -
Bisa05g2250 666 MobiDBLite consensus disorder prediction 78 97 - -
Bisa05g2250 666 Pfam Ubiquitin fusion degradation protein UFD1 186 356 IPR004854 GO:0006511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa05g2250 UFD1 4.5e-48 CL0402