Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2226 ATGATATATAATATCATAGTTCTCATTTTTGGCATCGTTCGGCACTTGTTTTCATCAGAGACGACAACCATGGTTGCCGCCAAGAAAACCAAGAAGACCCATGAGAGCATTAACAACAGGCTCGCTCTTGTGATGAAGAGCGGGAAATATACCCTGGGTTACAAAACGGTTCTGAAATCCCTGAGGAACTCCAAAGGCAAATTGGTTATCATTGCCAACAATTGTCCGCCTTTAAGAAAATCAGAGATAGAGTATTATGCTATGCTTGCCAAAGTGGGCGTACATCATTATAACGGGAACAACGTGGATTTGGGCACAGCTTGTGGCAAGTATTTCAGAGTTTGTTGCCTCAGTATTATTGATCCTGGTGATTCGGACATTATCAAGACAATGCCTGGTGATCACTAG 408 0.424 MIYNIIVLIFGIVRHLFSSETTTMVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRNSKGKLVIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTMPGDH 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2226 135 PANTHER RIBOSOMAL PROTEIN L30 24 133 IPR039109 GO:0003723
Bisa05g2226 135 ProSitePatterns Ribosomal protein L30e signature 1. 47 71 IPR022991 -
Bisa05g2226 135 FunFam 60S ribosomal protein L30 25 131 - -
Bisa05g2226 135 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 36 128 IPR004038 -
Bisa05g2226 135 Hamap 50S ribosomal protein L30e [rpl30e]. 35 132 IPR000231 GO:0003723|GO:0003735|GO:0022625
Bisa05g2226 135 ProSitePatterns Ribosomal protein L30e signature 2. 103 123 IPR022991 -
Bisa05g2226 135 Gene3D - 25 131 IPR029064 -
Bisa05g2226 135 SUPERFAMILY L30e-like 36 130 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2226 Bisa-ChrBisa05 50267360 50271102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2226 24 135 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 85.714 1.73e-71 207