Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2210 ATGTCTCACTCTTTCGGCCTTTCCCTGCTCGGCTCATCTCTAATCTCCCCATATCTCCTCTCCACGATACTTGGTCATGTTGTTGTCGTCGTCGAATCTCCTAGTCTTGGCCTTGTTACCTTGTATTGTTGCCTCAATCTCCCCTTGTCCTCGTTGCTTTGGGACATGGATTCGTTTGAGCCAGATGGAAATGGGTCGGGGGACAATTTGCCACCGCCGCCTTCCATTATCCCGCCCAATGTTGAATCAGTGAAAGTAGAACAAGAACTTCCTCCTGAGCCGGTCAAGAAAAAAGTTTCCCGGCTTCCAATGGCCAGACGAGGTGTGGGATCGAAAGGAAGTAAAATACCTCTTTTTACTAACCACTTCAAAGTCAATGTTAGTAACAATGATGGCCATTTCTTCCACTACAGTGTATCTGTTTCTTATGAAGATGGACGCCCTGTAGAAGGCAAGGGTGTAGGAAGAAAAATAATTGATAGGGTGCAGGAGACTTATGACTCTGAGTTAGCTGGGAAGAACTTTGCCTACGACGGGGAGAAGAGTTTATTTACTGTTGGCCCTCTTCCTCGAAACAAGCTTGAATTCACTGTTGTTCTGGAGGATATCACATCAAACCGAAATAATGGCAATTCAAGCCCTAATGGTCATGGGAGTCCTAATGAGAGTGACAGGAAGAGGATGCGACGCCCATATCGTTCCAAAACATTTAAAGTGGAGATTAGTTATGCCGCTAAGATTCCTATGCAGGCCATTTCCAATGCATTGCGCGGACAAGAATCTGAAAATTTTCAGGAAGCTATTAGAGTTTTTGATATTATATTAAGGCAACATGCTGCCAAGCAAGGGTGTTTACTTGTTCGCCAGTCTTTCTTCCACAATGATCCAAGGAATTTTGCTGATGTGGGAGGTGGGGTTCTAGGCTGCAGAGGTTTCCATTCAAGTTTCAGAACTACACAAAGTGGCTTGTCGCTCAACATGGATGTATCAACAACGATGATCATACAACCTGGTCCTGTGGTGGATTTTTTGATTGCTAACCAAAATGTGCGAGATCCATATTCAGTTGATTGGGCAAAGGCAAAAAGGATGCTTAAAAATCTGAAGATTAAGACTAGCCCTTCCAATCAAGAGTACAAGATAACTGGGCTCAGTGAACTCCCATGCAGGGAGCAGACGTTTTCCCTGAAGACCAAAGGTGGAAAGGATGGTGATGATATCGCAGAGGAAGTTGTTACTGTTTATGATTATTTTGTTAATAATCGTAAGATAAACCTCCGTTATTCTGCTGATCTTCCATGTATTAATGTTGGGAAACCAAAACGTCCCACATACTTCCCTCTGGAGCTTTGCAATTTGGTATCCTTGCAACGATATACAAAATCACTATCCACACTTCAAAGAGCTTCACTGGTGGAGAAGTCTCGGCAGAAGCCACAAGAGAGGATGAGGGTTTTGTCTGATACACTGAAAAGCAGCAAGTATGATTCTGAACCTATGCTTCGAAATTGTGGAATTTCAATAAGCACTGGCTTTAGCCAAGTCGAGGGTCGTGTTTTGCAAGCTCCAAGGCTGAGATTTGGCAATGGGGAGGACTTCAATCCAAGGAATGGGAGATGGAATTTAAATAATAAGAAAATAGTGCAGCCAACAAAGATAGAACAATGGGCTGTGGTGAACTTTTCTGCACGCTGTGATATACGAGGGCTTGTGCGGGATTTGATTAAATGTGCTGGAATGAAAGGAATTCCCATAGAAGATCCATTTGATGTGTTTGAAGAAAATCCTCAGTTCAGGCGCGCTCCACCAATGGTTAGAGTGGAGAAGATGTTCGAAGAGATCCAGTCCAAGCTTCCTGGGCCCCCTAAGTTCCTTCTTTGTCTGCTTCCTGAGCGAAAAAACTCTGATCTTTATGGTCCATGGAAACGGAAAAATCTTGCTGAGTTTGGAGTTGTTACTCAATGCATAGCTCCTACAAGGGTCAATGACCAATATCTCACCAATGTTTTGATGAAGATCAATGCCAAGCTTGGTGGGCTGAATTCGATGTTGACTGTTGAACATGCTCCCTCAATTCCTGTTGTTTCCAAAGCTCCCACCATCATTCTTGGCATGGATGTCTCACATGGCTCGCCAGGGCAGTCTGATATTCCTTCAATTGCTGCGGTTGTCAGCTCCAGACAGTGGCCTCTGATATCAAAGTATAGGGCATGTGTCCGTACACAGTCTCCTAAAGTTGAGATGATAGATAATCTGTTCAAGCCAGTGTCTGAGAAGGAGGATGATGGCATATTCAGGGAACTTCTGATTGACTTCTATTTAAGTTCTGGGAAAAGAAAACCACAAAATATAATAATATTCAGGGATGGTGTATCTGAGTCACAGTTCAATCAAGTATTGAACATTGAACTCGATCAAATTATTGAGGCCTGTAAATTTCTTGATGACCAGTGGTCCCCCAAATTTGTGGTAATTGTTGCTCAGAAAAACCACCACACAAAATTTTTCCAGCCTTCCTCTCCAGACAATGTTCCCCCTGGAACTGTTATTGATAATAAAATTTGTCATCCGCGGAATTATGACTTCTATTTATGTGCACATGCTGGAATGATAGGAACTAGTAGACCTACACATTACCATGTTCTGTTAGACGAGATTGGTTTCTCGGCTGATGATCTGCAGGAACTTGTGCATTCTCTGTCATACGTATATCAGCGGAGCACCACTGCTATTTCTGTTGTTGCTCCAATATGCTATGCACACTTAGCTGCAACACAAATGGGGCAATTCATGAAATTCGATGACAAGTCTGAGACTTCTTCAAGCCACGGTGGGGTGTCTTCTGCTGGGTCGGTTCCGGTCCCTCAGCTGCCCAAATTGCAGGAAAGCGTTTCCAGCTCAATGTTCTTTTGTTGA 2916 0.4355 MSHSFGLSLLGSSLISPYLLSTILGHVVVVVESPSLGLVTLYCCLNLPLSSLLWDMDSFEPDGNGSGDNLPPPPSIIPPNVESVKVEQELPPEPVKKKVSRLPMARRGVGSKGSKIPLFTNHFKVNVSNNDGHFFHYSVSVSYEDGRPVEGKGVGRKIIDRVQETYDSELAGKNFAYDGEKSLFTVGPLPRNKLEFTVVLEDITSNRNNGNSSPNGHGSPNESDRKRMRRPYRSKTFKVEISYAAKIPMQAISNALRGQESENFQEAIRVFDIILRQHAAKQGCLLVRQSFFHNDPRNFADVGGGVLGCRGFHSSFRTTQSGLSLNMDVSTTMIIQPGPVVDFLIANQNVRDPYSVDWAKAKRMLKNLKIKTSPSNQEYKITGLSELPCREQTFSLKTKGGKDGDDIAEEVVTVYDYFVNNRKINLRYSADLPCINVGKPKRPTYFPLELCNLVSLQRYTKSLSTLQRASLVEKSRQKPQERMRVLSDTLKSSKYDSEPMLRNCGISISTGFSQVEGRVLQAPRLRFGNGEDFNPRNGRWNLNNKKIVQPTKIEQWAVVNFSARCDIRGLVRDLIKCAGMKGIPIEDPFDVFEENPQFRRAPPMVRVEKMFEEIQSKLPGPPKFLLCLLPERKNSDLYGPWKRKNLAEFGVVTQCIAPTRVNDQYLTNVLMKINAKLGGLNSMLTVEHAPSIPVVSKAPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVSEKEDDGIFRELLIDFYLSSGKRKPQNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDDQWSPKFVVIVAQKNHHTKFFQPSSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDEIGFSADDLQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMGQFMKFDDKSETSSSHGGVSSAGSVPVPQLPKLQESVSSSMFFC 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2210 971 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 96 934 - -
Bisa05g2210 971 SMART Piwi_a_2 624 932 IPR003165 GO:0003676
Bisa05g2210 971 Pfam Argonaute linker 1 domain 287 335 IPR014811 -
Bisa05g2210 971 SUPERFAMILY Ribonuclease H-like 608 930 IPR012337 -
Bisa05g2210 971 Pfam Mid domain of argonaute 534 587 IPR032473 -
Bisa05g2210 971 MobiDBLite consensus disorder prediction 205 231 - -
Bisa05g2210 971 FunFam Protein argonaute 3 692 971 - -
Bisa05g2210 971 Pfam Argonaute linker 2 domain 481 527 IPR032472 -
Bisa05g2210 971 Gene3D paz domain 331 459 - -
Bisa05g2210 971 Gene3D - 691 971 IPR036397 GO:0003676
Bisa05g2210 971 MobiDBLite consensus disorder prediction 205 219 - -
Bisa05g2210 971 CDD Piwi_ago-like 499 926 IPR045246 -
Bisa05g2210 971 ProSiteProfiles Piwi domain profile. 624 932 IPR003165 GO:0003676
Bisa05g2210 971 CDD PAZ_argonaute_like 337 454 - -
Bisa05g2210 971 Pfam N-terminal domain of argonaute 115 275 IPR032474 -
Bisa05g2210 971 MobiDBLite consensus disorder prediction 935 949 - -
Bisa05g2210 971 FunFam Protein argonaute 7 332 459 - -
Bisa05g2210 971 SUPERFAMILY PAZ domain 332 495 IPR036085 GO:0005515
Bisa05g2210 971 ProSiteProfiles PAZ domain profile. 362 455 IPR003100 GO:0005515
Bisa05g2210 971 MobiDBLite consensus disorder prediction 935 954 - -
Bisa05g2210 971 Pfam Piwi domain 625 932 IPR003165 GO:0003676
Bisa05g2210 971 Gene3D - 519 685 - -
Bisa05g2210 971 SMART DUF1785_2 285 337 IPR014811 -
Bisa05g2210 971 Pfam PAZ domain 341 471 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2210 Bisa-ChrBisa05 49830397 49844354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2210 72 971 Eukaryotic Initiation Factors Gene Family AT1G48410 34.937 5.96e-170 522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g2210 05 49830397 49844354 Bisa05g2210 05 49830397 49844354 ECH