Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2203 ATGGCTAAGAAGCGAAAGCTTCGATCATCTGAACCTGAATCTGCCAAGGTTGTTGATTCACAACCTGTTCAGCAAGAACAACCCCTAGAGCAGCAAATCCATGAGGAAGTGAGAGGGGACGAACAACACAACCCCGAAGCAACCCTAGAAGAAGAGCACCAAGGACACGAAACTATGGCGGTGGATGATGTCACGCAACGAGGGGATGTAAAATTAGAAGAAAACGCCGATGTAGAAGGACATATAGAAAACAACCCTGAAGAGCAGGAGGGCGTGTACCCTGAAACGGCACAAACATCGATTGATGCTGCCTCATTCGAATCAGCTCAGGTTGATGCGAATGGAACTGAAGAAGGTAATGAGAATGATGACGATGGTGACGTTTTGGACGAAGAAGAGTCTGTAGAGAAGCTTCTTGAGCCCTTTACGAAGGAGCAGCTGAACTCTCTTGTCAAGCAAGCTGTGGAGAAGTACCCAGATTTTATAGAGAATATTCGCCAGCTGGCGGATGTGGACCCTGCTCACCGAAAAATTTTCATCCATGGTCTTGGCTGGGACACCACTGCTGAAACCCTTACTAGTGTGTTTGGGACGTATGGTGAGATTGAGGATTGCAAGGCCGTCACTGACAAGGTCTCTGGCAAATCCAAAGGCTATGCTTTCATCTTGTTCAAACACCGAAGTGGGGCTCGTAAGGCTCTAAAGCAGCCCCAGAAGAAGATTGGGAATCGAACTACATCGTGTCAATTGGCCTCCGCTGGACCTTTCCCCTCGCCCGCAATTTGGGGAGATAGAGGATGGTCCTTTGGGTCTTGA 816 0.4865 MAKKRKLRSSEPESAKVVDSQPVQQEQPLEQQIHEEVRGDEQHNPEATLEEEHQGHETMAVDDVTQRGDVKLEENADVEGHIENNPEEQEGVYPETAQTSIDAASFESAQVDANGTEEGNENDDDGDVLDEEESVEKLLEPFTKEQLNSLVKQAVEKYPDFIENIRQLADVDPAHRKIFIHGLGWDTTAETLTSVFGTYGEIEDCKAVTDKVSGKSKGYAFILFKHRSGARKALKQPQKKIGNRTTSCQLASAGPFPSPAIWGDRGWSFGS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2203 271 SMART rrm1_1 177 249 IPR000504 GO:0003723
Bisa05g2203 271 MobiDBLite consensus disorder prediction 1 95 - -
Bisa05g2203 271 SUPERFAMILY RNA-binding domain, RBD 165 258 IPR035979 GO:0003676
Bisa05g2203 271 MobiDBLite consensus disorder prediction 31 88 - -
Bisa05g2203 271 Gene3D - 102 257 IPR012677 -
Bisa05g2203 271 MobiDBLite consensus disorder prediction 14 30 - -
Bisa05g2203 271 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 176 253 IPR000504 GO:0003723
Bisa05g2203 271 PANTHER GEO13361P1-RELATED 165 256 - -
Bisa05g2203 271 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 178 245 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2203 Bisa-ChrBisa05 49667555 49668471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2203 125 255 C2H2 Transcription Factor Family AT2G19380 46.565 1.62e-35 132