Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2174 ATGGAAGCGGTGAAAGATGAAAATGTGGTAGTTGGAGAAGGAGCCGGGGAAGGAGGAGGAGGTGGTGCTGGTGCGGCGGAGGAGGTGGTTCTGAAGAAGGGTCCGTGGACAGCGGCGGAGGATGCAGTTCTAATGGAATATGTGACCAAACACGGTGAGGGGAACTGGAACGCCGTGCAGAGGAACACAGGGCTGGCTCGCTGTGGCAAGAGCTGTAGGCTCCGATGGGCTAACCATTTGCGACCTAATTTAAAGAAGGGTGCCTTCTCTCCCGAGGAAGAGAAGCTCATTCTCGAACTTCACGCCCAGTATGGCAACAAATGGGCGCGTATGGCCGCTCTGTTACCTGGGCGAACGGACAACGAGATCAAGAATTATTGGAACACGAGGGTGAAGCGACGGCAACGGCAAGGCTTGCCTCTGTATTCCGACGACCGTGAACGTCCTACTTCATCTCCCACGCCTATCACGCCCACAGGACAAAACCCAAACCCTCCTCCTCCTGCTACACAATACGATTTCCTTCATCAGTACCATCACCATCCTCTATCTTCTCCAACCCCACCTCCTCACTCGCCTCTTTCTTCCCCTCTCAAGCCAAAACCCACCTTCTCTTCTCTCCCTCATGACCACATCATCACCTCCTCTGCTTCTTCTTCTTCCCCTTCTCCGCTTTCCTTCATCTTCAACAGACCCGCTCCACTCCTCTGTAACTCACTCGGTTTCAAGCGTTTCCGCACTTCTTCAGGCTATCCCCTCCATGTCCCTCCCTCTGCTTCATTCTCTAATCAGCCCCTGACAATGACGACAACGCAGTTGGGCGGGTACTCTGGATTCGGGTTCTCGGGTCAACTCAACTCGGGTTCGTCTCAGATGTATCAGACCCCTTTAGAGTCAGATCGAGGAGGGGTTCTGAACCAGTTCTCGAATTTCTCCACGAAATTGGAGCTCCCTTTAAACCAATTCTCGCAACCCGTGATAGAGCCAGAGATCAAGTTTGATATGCAAATGAACAATCCTGCTCTGAAGAACGGTGGAGGTGGGTTTCTGGGGGATCTTCTCTTCGACACTCAGGCGTTACCCTCTGACCAAACGGCATCCAAGAAACGAAGTTTCTCGAGTTTAAATGAAGGAAACGACATGTTTGATGCATGCCGAGGCTTTGATGATTTGCCCACTGCTTACTGGTCTAATCCTTCAGGATTGAAGCTGAAGGAAGAAGCACAAGATCTGAGCAAATCCATGAACGATGATTTATCTTCGCTGCTTTCTGAAATGCCGTCTAATATGCCGGTTCATGTTTGGCCTACTAGTGGCAGTGCAGGAGAGGCCTCTAATGTTCAATCTTCTTGTGTGATGCCAGATGATAATTTTGGACTGGACATCAAGCCCATAGCTTCGTTGTTTCCCACCACAACGAACCATAATGACAGTTCTGGGTGCTACTCTTGGGACAATTTACCTGGAATCTGCTGA 1476 0.5081 MEAVKDENVVVGEGAGEGGGGGAGAAEEVVLKKGPWTAAEDAVLMEYVTKHGEGNWNAVQRNTGLARCGKSCRLRWANHLRPNLKKGAFSPEEEKLILELHAQYGNKWARMAALLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDDRERPTSSPTPITPTGQNPNPPPPATQYDFLHQYHHHPLSSPTPPPHSPLSSPLKPKPTFSSLPHDHIITSSASSSSPSPLSFIFNRPAPLLCNSLGFKRFRTSSGYPLHVPPSASFSNQPLTMTTTQLGGYSGFGFSGQLNSGSSQMYQTPLESDRGGVLNQFSNFSTKLELPLNQFSQPVIEPEIKFDMQMNNPALKNGGGGFLGDLLFDTQALPSDQTASKKRSFSSLNEGNDMFDACRGFDDLPTAYWSNPSGLKLKEEAQDLSKSMNDDLSSLLSEMPSNMPVHVWPTSGSAGEASNVQSSCVMPDDNFGLDIKPIASLFPTTTNHNDSSGCYSWDNLPGIC 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2174 491 Pfam Myb-like DNA-binding domain 33 80 IPR001005 -
Bisa05g2174 491 Pfam Myb-like DNA-binding domain 86 129 IPR001005 -
Bisa05g2174 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 80 IPR017930 -
Bisa05g2174 491 Gene3D - 88 134 - -
Bisa05g2174 491 CDD SANT 35 80 IPR001005 -
Bisa05g2174 491 CDD SANT 88 129 IPR001005 -
Bisa05g2174 491 MobiDBLite consensus disorder prediction 1 24 - -
Bisa05g2174 491 MobiDBLite consensus disorder prediction 156 170 - -
Bisa05g2174 491 FunFam MYB-related transcription factor 32 85 - -
Bisa05g2174 491 Coils Coil 405 425 - -
Bisa05g2174 491 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Bisa05g2174 491 FunFam Transcription factor GAMYB 88 134 - -
Bisa05g2174 491 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
Bisa05g2174 491 SUPERFAMILY Homeodomain-like 32 127 IPR009057 -
Bisa05g2174 491 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 20 449 - -
Bisa05g2174 491 SMART sant 85 133 IPR001005 -
Bisa05g2174 491 SMART sant 32 82 IPR001005 -
Bisa05g2174 491 MobiDBLite consensus disorder prediction 183 197 - -
Bisa05g2174 491 Gene3D - 32 85 - -
Bisa05g2174 491 ProSiteProfiles Myb-like domain profile. 28 80 IPR001005 -
Bisa05g2174 491 MobiDBLite consensus disorder prediction 134 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2174 Bisa-ChrBisa05 49044031 49045667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2174 9 491 MYB Transcription Factor Family AT4G26930 35.845 4.23e-70 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa05g2174 Myb_DNA-binding 3.9e-12 CL0123