Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2155 ATGAGGAAACCCAAGTCAAAGGACTTTCGCAAGCGACAACGGCTCCTAGAGGAAGAAGAGATTAAGCTCTTGGATTCATGGATTCAATCCCAGAAACCAGACTCCGGCTCCAACCCCATGTCGTTTCCTCCTTTACACTCTAAAGACCCCGTAGGTCGCATAGACGACAATAAGTATTCTCGCTATGCCGGTGTTACGAGTTTCGACCAGTTGCCAATTTCTAAGAAAACCAAGGATCGATTGCGCGAAACTAAGTTCGTCAAGATGACTGATATACAGAGGGCTTCTTTGCCCCACGCGCTTTGTGGACGAGATATTCTCGGGGCGGCTAAAACTGGGTCGGGAAAAACCTTGGCCTTCATTATTCCGGTCTTGGAAAAGTTATATAGAGAGAAATGGGGGCCTGAAGATGGGGTAGGCAGCATCATCATATCCCCTACCAGAGAATTAGCTGTTCAACTGTTTGATGTTTTAAAAAGTGTTGGTAAGCACCACACATTTAGTGCTGGCCTCCTGATTGGTGGTCGCAAGGAGGTTGACATGGAGAAAGAACATGTGAATGAGCTGAACATTTTGATCTGCACGCCTGGTCGGCTTCTACAGCACATGGATGAAACTCCAAACTTTGATTGTTCACAGATTCAGGTTTTGGTACTTGATGAGGCAGATCGTATCCTTGACAATGGATTTAAGAAGGAACTAAATGCCATCATCTCACAGCTTCCAAAGCATAGACAAACCATGCTTTTCTCAGCAACTCAAACAAAGTCTATTCAAGATCTTGCAAGACTAAGTTTAAAGGACCCAGAGTATCTGAGCGTCCATGAAGAGTCTCTGACTGCCACTCCTTCTCTCTTGAGACAGCTTGTGATGATTGTTCCTCTAGACCAAAAGTTAGACATGTTGTGGAGTTTCATAAAGTCACATCTTAATTCCAAAACACTTGTCTTTCTTTCTAGCTGTAAACAAGTAAATCATTTCAATCTGATCAGTTTATGTTGGATTTGCTGTGTAAAATTTGTCTTTGAAGCATTTAAGAAACTACACCCTGGTATACCCTTGAAGTGCCTTCATGGGCGAATGAAGCAGGAGAGAAGGATAGCAATATATTCTGAGTTTTGTGAGAAGCGCTCAGTTCTCTTCTCGACTGATGTGGCTGCAAGAGGCCTTGATTTTAATAAGGCAGTTGACTGGGTTGTTCAGGTGGATTGTCCGGAAAATGTAGCATCTTACATACACAGAGTTGGTCGTACTGCTCGCTACAAGTCTGGGGGGAGGTCAGTTTTATTTCTGATGCCTTCAGAGACTAAAATGCTCGAAAAATTAGAAGCAGCTAAAGTTCCTGTGCATCTTAATAAGCCTAGGAAAGAACGACTGCAACCAGTTTCCGGTTTGTTGGCAGCTTTACTGGTCAAGTACCCAGACCTCCAGCAACGGGCACAAAGGGCCTTTGTAACATATTTGAGATCCATTCATATCCAGAAGGATAAAGAAATCTTTGATGTTATGAAATTGCCAATTGATGAATATTCAGCATCGTTGGGTCTGCCAATGACCCCCAAAATCCGTTTTCTTAACCAGAAAATTAAATCTAAAGCTGTGTCACCACAACCAGTTACAGCTGAACCAAAAGATTCAAACAAGGAGATTGAATTGGAGGCATTAAGAGAGGAGCTAGACCATAGTGGTCCTGAGGAAGAAGAAGCAGAAAAAGCTCTTCTTTTGCCAGATAATTCCTCGGATGAAAGGGAAGGGAAAGCATCTGAAATTTTAGATGTCATACCACCAACCCGTGTTTCAAAGAAAAAGAAGCTCAAGATCAACATTCATAGACCGTTGGGGACTAGAGTTGTATTTGATGATGAAGGGAATGCACTACCTCCTCTAGCCAGGATTGCTGATACACAAAGTGGCAAGGAAACGTTGCTGCTTGATCCAGAACAAAAAGCTGAACACTATAGAAAGATGCGGGAGGAATTGAAGAAGGTGGACAAGGAAGACAAGCTTCTGCAACGTAAGCGCCATAGAGAGAAGAGAATCAAGGAGAAGATGAAATTGAAGAAAATGAATGCAGAAGAAGACAACAATGATATTTCAGGGTCAGAAGTTGAAACTGCAGATAGACAGCATAAAAGGAGCAAGACATATTTTGATATTGACAGTGATGACAGTAATAAAATTGAAGTCACAGTTAAAGGGGGCATTAGCACTAACTCTGTTACTTTGGAGGAGCAAGAAGCACTGGCTTTGAAATTGTTAAATTCCATGCACTCATAG 2277 0.4238 MRKPKSKDFRKRQRLLEEEEIKLLDSWIQSQKPDSGSNPMSFPPLHSKDPVGRIDDNKYSRYAGVTSFDQLPISKKTKDRLRETKFVKMTDIQRASLPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYREKWGPEDGVGSIIISPTRELAVQLFDVLKSVGKHHTFSAGLLIGGRKEVDMEKEHVNELNILICTPGRLLQHMDETPNFDCSQIQVLVLDEADRILDNGFKKELNAIISQLPKHRQTMLFSATQTKSIQDLARLSLKDPEYLSVHEESLTATPSLLRQLVMIVPLDQKLDMLWSFIKSHLNSKTLVFLSSCKQVNHFNLISLCWICCVKFVFEAFKKLHPGIPLKCLHGRMKQERRIAIYSEFCEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSGGRSVLFLMPSETKMLEKLEAAKVPVHLNKPRKERLQPVSGLLAALLVKYPDLQQRAQRAFVTYLRSIHIQKDKEIFDVMKLPIDEYSASLGLPMTPKIRFLNQKIKSKAVSPQPVTAEPKDSNKEIELEALREELDHSGPEEEEAEKALLLPDNSSDEREGKASEILDVIPPTRVSKKKKLKINIHRPLGTRVVFDDEGNALPPLARIADTQSGKETLLLDPEQKAEHYRKMREELKKVDKEDKLLQRKRHREKRIKEKMKLKKMNAEEDNNDISGSEVETADRQHKRSKTYFDIDSDDSNKIEVTVKGGISTNSVTLEEQEALALKLLNSMHS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2155 758 Gene3D - 49 278 IPR027417 -
Bisa05g2155 758 SMART helicmild6 339 422 IPR001650 -
Bisa05g2155 758 Pfam Domain of unknown function (DUF4217) 466 522 IPR025313 -
Bisa05g2155 758 MobiDBLite consensus disorder prediction 558 586 - -
Bisa05g2155 758 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 272 IPR014001 -
Bisa05g2155 758 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 66 94 IPR014014 GO:0003724
Bisa05g2155 758 PANTHER RNA HELICASE 63 596 - -
Bisa05g2155 758 Coils Coil 653 692 - -
Bisa05g2155 758 SMART ultradead3 85 289 IPR014001 -
Bisa05g2155 758 CDD SF2_C_DEAD 286 431 - -
Bisa05g2155 758 Gene3D - 284 537 IPR027417 -
Bisa05g2155 758 SMART DUF4217_3 461 524 IPR025313 -
Bisa05g2155 758 CDD DEADc_DDX10 77 275 - -
Bisa05g2155 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 274 IPR027417 -
Bisa05g2155 758 MobiDBLite consensus disorder prediction 27 50 - -
Bisa05g2155 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 437 IPR027417 -
Bisa05g2155 758 MobiDBLite consensus disorder prediction 690 710 - -
Bisa05g2155 758 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 294 470 IPR001650 -
Bisa05g2155 758 Pfam DEAD/DEAH box helicase 90 260 IPR011545 GO:0003676|GO:0005524
Bisa05g2155 758 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 218 226 IPR000629 -
Bisa05g2155 758 MobiDBLite consensus disorder prediction 28 42 - -
Bisa05g2155 758 Pfam Helicase conserved C-terminal domain 298 421 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2155 Bisa-ChrBisa05 48381760 48395133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2155 65 443 Eukaryotic Initiation Factors Gene Family AT3G19760 28.125 4.73e-37 142