Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2110 ATGGCAAAGTGTTGCACCACCAACACATACGAAGAGGTTCGGAAGCAAAGACTTGAAGAAAACAAAAAGCGATTTGAGGATTTGGGAATTTTGAAGATTTCGAAAAATTTGACTAAACTTGCCACTCCTGATAAGAAAACTCTGCAACATCGTCCAACACCAAAATCAAAATCAAAGAGTAATGACGTAGTGGAACTAAGACGCTCTTCTCGCATGCGAAATTCAGTTCCTTCATATCGTGAAGATGAAGGCATAGAGCTTCCAACTTTGCGAAAGAGGTCAAGGTCATCTTCATCAGCATGGGGAAGTTACGTTGCTAGGCCTCTAGATGAAATCAAAGAAGCCACGGAAGAAGAAAGAAATTATGCTTTAATGGCTGCAGAAGCACTCCTAAGCAATTTGCAGCCGACAAATCCAACGTTTATTAAATCAATGGTCCGGTCTCATGTTTATAGCTGCTTTTGGTTGGGTCTCCCTACTAGATTTTGTGAGGAACATCTCCCAAAGACTGTGTGTGACATGGTTCTAGAGGATGAAAAAGGCTCAGAATATGAGGCTGTTTTCATTGGTAATAGAACTGGGCTTAGCGGAGGCTGGAGAGCATTTGCATTGGATCATAAGTTGGATGATGGTGATGCACTTATTTTTGAATTAGTTGAAACTGCTAGGTTTAAGATTTATATTGTTAAAGCCTTTCCAGATTCTGATGAAATTATTGAATCAGCAAGTTCTGATGATCATCTGGAAGAAACTAATGTTGACAATGAAGCTAAGCCACAGGGGATAAACTCAACCAGGAAAACTAGATTTTCTCAGAGAAAATCACAGAAGGAATCTGAAGATTCTAAACTGCTTACTGATGATGATACAAAAAAGAAAGAACATATTGAAGAAGGAAAAGATTGTACTGCTGAGACAGCAGAGGCAGCCATGAAGGATAATTCTGAGACAAGCAAGACAAGGAGGTCAAAACAACATCGTATTGTACATGAAAGTGATGACTTGGAAAGTACTGTGAAGCCAGAAAGTAAAACTGAAAACGAAAACAAAACAAATGTGGCTGATTCTGGTAAAAAAAATGGATTTGTTGAAGATGGTAGTTGTCAGTTAAAGAAAGTGGAAGAAGCAGGCAAATCTGTTTCACATAAACAAAGAAAAAAACCAGGTCCTAAATTATTCAGAAAGAGAGCATAA 1194 0.3844 MAKCCTTNTYEEVRKQRLEENKKRFEDLGILKISKNLTKLATPDKKTLQHRPTPKSKSKSNDVVELRRSSRMRNSVPSYREDEGIELPTLRKRSRSSSSAWGSYVARPLDEIKEATEEERNYALMAAEALLSNLQPTNPTFIKSMVRSHVYSCFWLGLPTRFCEEHLPKTVCDMVLEDEKGSEYEAVFIGNRTGLSGGWRAFALDHKLDDGDALIFELVETARFKIYIVKAFPDSDEIIESASSDDHLEETNVDNEAKPQGINSTRKTRFSQRKSQKESEDSKLLTDDDTKKKEHIEEGKDCTAETAEAAMKDNSETSKTRRSKQHRIVHESDDLESTVKPESKTENENKTNVADSGKKNGFVEDGSCQLKKVEEAGKSVSHKQRKKPGPKLFRKRA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2110 397 MobiDBLite consensus disorder prediction 383 397 - -
Bisa05g2110 397 SUPERFAMILY DNA-binding pseudobarrel domain 135 229 IPR015300 -
Bisa05g2110 397 Gene3D - 115 232 IPR015300 -
Bisa05g2110 397 MobiDBLite consensus disorder prediction 368 382 - -
Bisa05g2110 397 MobiDBLite consensus disorder prediction 242 397 - -
Bisa05g2110 397 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 46 231 IPR044837 -
Bisa05g2110 397 MobiDBLite consensus disorder prediction 271 353 - -
Bisa05g2110 397 MobiDBLite consensus disorder prediction 39 80 - -
Bisa05g2110 397 CDD B3_DNA 139 230 IPR003340 GO:0003677
Bisa05g2110 397 SMART B3_2 141 232 IPR003340 GO:0003677
Bisa05g2110 397 ProSiteProfiles B3 DNA-binding domain profile. 141 232 IPR003340 GO:0003677
Bisa05g2110 397 Pfam B3 DNA binding domain 141 228 IPR003340 GO:0003677
Bisa05g2110 397 MobiDBLite consensus disorder prediction 44 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2110 Bisa-ChrBisa05 46884531 46893873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2110 10 231 B3 DNA Binding Superfamily AT5G58280 49.407 4.69e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa05g2110 B3 1.3e-15 CL0405