Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2109 ATGTTTGGTGATTTCTACCTTCTTGCTGGGATGTTTCTTTCAAAAGGTAGGAAGTATGCAGTTGTTTTCAGCTTGTGGTTCTGTTGCTACTTGCTACTGGTTGCGGCGCAGGATGTCACTGATCCTACTGAAGTTGATGCATTGAAAACCATCAAAGAGAGTTTGATTGATCCTAACAGAAACTTGAGCAACTGGAATCGTGGAGATCCATGTTCATCTAACTGGACAGGGGTTGTATGCTTTAATACAACATTAGTTGATGGCTATCGGCATGTTCAAGAATTGCAACTACTGAATATGAATTTGTCTGGAACTTTGGCACCAGAGATTGGCCGCTTATCTTATATGAAAATATTGAGCTTCATGTGGAACAACATAACTGGGAGTATACCGAAAGAAATTGGCAACATTAAAACTTTGGAACTCTTGCTCGTGAATGGAAATAAATTAACAGGTTCTCTGCCGGAAGAGCTTGGTTATCTTCCAGTTCTGAACAGAATACAAATTGATCAAAACCAAATATCAGGACCTTTACCTGCATCATTTGCAAACCTGAACATGACAAAGCACTTTCACATGAACAACAATTCAATAAGTGGACAAATCCCTCCTGAAATTTCCCGCTTGCCAAACCTTGTTCATCTCCTTCTTGACAACAACAACCTGTCAGGATATCTTCCCCCTCAGCTCTCTGAGTTGCCAAGCTTACTAATAATTCAACTTGATAACAATAACTTCAGCGGGAATACCATTCCAGAGTCTTATACCAACATGTCGAAATTGTTGAAAATGAGCCTTCGGAATTGCAACTTGGGAGGACCAATTCCTGATTTAAGCAGGATACCACAACTTGGTTATCTTGACCTCAGTTCCAATCAGTTGAACGGATCAATTCCTCCAAATAAGCTTTCAGACAATATCACAACCATTGATTTATCAAACAACAAGCTTACTGGAACTATTCCATCCTACTTTTCTCGTCTGCCACTTATTCAGAAATTGTCAATTGCCAACAATTCTTTGAATGGCAGTGTTCCTTCTGCTATTTGGCAGAACAGGGCTCTAAATGGAACAGAAACATATCTCTTGGAATTTCAAAATAATGATTTCACAAGCATATCAGGCAGTACTACCCTTCCTCCAAATGTTACACTTTGGCTTGGAGGAAATCCTCTATGTTCAAATAGCAGTTTAGCTACGTTCTGTGGATCTGAAATTGCCAACAACACTGATAATCGGGTTTCAACAAACTCCACTGATAGCTGTCCAAGTCAATCATGTCCCCCTCCTTATGAATATTCTAGCACATCTCCTGAAAAGTGTTTCTGTGCAGCACCTTTGATTGTTGAGTATCGGCTAAAAAGTCCTGGATTTTCAGATTTTCGTCCATACATAAATTTATTTGAGAGCTATCTGACGTCTGGTCTTGTCATTTATATATATCAACTAGACCTTGTGACATTTATGTGGCAAGAAGGGAAACGAGTTAGAATGTTCTTGAAGCTTTTTCCTGTATATAATGCTTCGAACAATAGCTCTCATATTTTCAACAGTAGTGAGGTTCTAAGAATAAGAAGCATGTTCACAGGATGGTTAATTCCAGACAGTGACATATTTGGGCCTTATGAACTGCTTGGCTTCACTCTCCTGGATCCTTACAGGAATGTGATAGAAACCGGTCAAAGTTCGGGCATAGGCACGGGTGTGGTGGTTGGCATAGTATTGGGGGCAATTGCCTGTGCCGTTATATTATCTGCAATTGTTAGTTTTGTTATATTCAGGATATTCATGAAAGGCCGTACAATTTCAAAACGACATCGAGCATCAAGGATTTCGATAAAAATTGATGGTGTGAGGGCTTTTACTTATGGAGAAATGGCACAGGCTACAAACAATTACTCTGCGCAGGTTGGCCAAGGGGGTTATGGGAAGGTTTATAAAGGTATTCTTGCTGATGGAACAGTCGTTGCCATAAAACGTGCACAGGAGGGGTCTCTGCAAGGTGAGAGGGAGTTCCTAACAGAAATACAATTACTATCCAGGTTACATCATCGCAACCTTGTGTCATTAGTTGGTTACTGTGATGAAGAAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGTACACTAAGGGATCACCTTTCTGCTACTTCAAGAGAAGCTCTGAGTTTTGCTATGAGAATGAGGATTGCACTAGGGTCAGCTAAAGGCATTCTGTATCTACATACAGAAGCTGATCCACCAATATTCCACCGAGATGTCAAGGCCAGCAACATATTATTGGATTCTAAGTTCACAGCAAAAGTTGCTGATTTTGGACTTTCACGGCTTGCCCCGATTCCAGATATTGAAGGAATTGTGCCTGCTCATGTATCTACTGTGGTCAAAGGGACCCCGGGTTACCTTGATCCAGAGTACTTCTTAACTCATAAGTTGACAGATAAGAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAGTTATTAACCGGGATGCAACCAATCTCGCATGGAAAAAATATTGTTAGAGAGGTTAATGTTGCATACCAATCTGGTGTGACATTCTCAGTTATTGATGGACGTATGGGGTCTTATTCTTCTGAGTGCGTCGAGAAATTTTTGGCTCTGGCCCTGAAGTGTTGCCAAGATGAGCCAGATGCGCGGCCTAAAATGGCAGAAGTGGTTCGAGAGCTCGAAAACATATGGTCTATGATGCCTGAATCTGATACCAAGAGAGCTGAATCTATAACCATTAGTGATTCTGGAAAATTAGTCAGTTCATCTTCATCCTCTACTACAAAGACTCCCTTTATATCAGCAGATGTGTCGGGCAGCGACCTTGTTAGTGGGGTAGTACCAACCATCACACCAAGATAG 2883 0.4083 MFGDFYLLAGMFLSKGRKYAVVFSLWFCCYLLLVAAQDVTDPTEVDALKTIKESLIDPNRNLSNWNRGDPCSSNWTGVVCFNTTLVDGYRHVQELQLLNMNLSGTLAPEIGRLSYMKILSFMWNNITGSIPKEIGNIKTLELLLVNGNKLTGSLPEELGYLPVLNRIQIDQNQISGPLPASFANLNMTKHFHMNNNSISGQIPPEISRLPNLVHLLLDNNNLSGYLPPQLSELPSLLIIQLDNNNFSGNTIPESYTNMSKLLKMSLRNCNLGGPIPDLSRIPQLGYLDLSSNQLNGSIPPNKLSDNITTIDLSNNKLTGTIPSYFSRLPLIQKLSIANNSLNGSVPSAIWQNRALNGTETYLLEFQNNDFTSISGSTTLPPNVTLWLGGNPLCSNSSLATFCGSEIANNTDNRVSTNSTDSCPSQSCPPPYEYSSTSPEKCFCAAPLIVEYRLKSPGFSDFRPYINLFESYLTSGLVIYIYQLDLVTFMWQEGKRVRMFLKLFPVYNASNNSSHIFNSSEVLRIRSMFTGWLIPDSDIFGPYELLGFTLLDPYRNVIETGQSSGIGTGVVVGIVLGAIACAVILSAIVSFVIFRIFMKGRTISKRHRASRISIKIDGVRAFTYGEMAQATNNYSAQVGQGGYGKVYKGILADGTVVAIKRAQEGSLQGEREFLTEIQLLSRLHHRNLVSLVGYCDEEGEQMLVYEFMPNGTLRDHLSATSREALSFAMRMRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSKFTAKVADFGLSRLAPIPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNVAYQSGVTFSVIDGRMGSYSSECVEKFLALALKCCQDEPDARPKMAEVVRELENIWSMMPESDTKRAESITISDSGKLVSSSSSSTTKTPFISADVSGSDLVSGVVPTITPR 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2109 960 Gene3D Ribonuclease Inhibitor 305 386 IPR032675 -
Bisa05g2109 960 ProSiteProfiles Protein kinase domain profile. 631 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2109 960 Gene3D Transferase(Phosphotransferase) domain 1 707 925 - -
Bisa05g2109 960 FunFam Leucine-rich repeat protein kinase family protein 597 706 - -
Bisa05g2109 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Bisa05g2109 960 Pfam Protein tyrosine and serine/threonine kinase 634 900 IPR001245 GO:0004672|GO:0006468
Bisa05g2109 960 SUPERFAMILY Protein kinase-like (PK-like) 618 928 IPR011009 -
Bisa05g2109 960 PANTHER RECEPTOR-LIKE PROTEIN 55 51 904 - -
Bisa05g2109 960 Gene3D Ribonuclease Inhibitor 40 304 IPR032675 -
Bisa05g2109 960 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 707 917 - -
Bisa05g2109 960 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 303 431 - -
Bisa05g2109 960 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
Bisa05g2109 960 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 201 302 - -
Bisa05g2109 960 CDD STKc_IRAK 637 903 - -
Bisa05g2109 960 SMART serkin_6 631 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g2109 960 SUPERFAMILY L domain-like 54 418 - -
Bisa05g2109 960 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 42 200 - -
Bisa05g2109 960 Gene3D Phosphorylase Kinase; domain 1 603 706 - -
Bisa05g2109 960 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2109 Bisa-ChrBisa05 46858305 46872587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2109 28 960 Receptor kinase-like Gene Family AT5G01950 58.157 0.0 1028
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bisa05g2109 PK_Tyr_Ser-Thr 3.6e-46 CL0016