Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2102 ATGGCGTTGCTGTTGAGGAAGGTGTGGGAATCAGTATCGAATCGTCCGACTTCGGGTTCAATTTCCAACTCAACGGAACGAGTTCGTTGCGTCGATTCACCTCTGGGTGCATTCGAGCAAATCCCTTCCGACATATTGATCCAAATTCTGAGGTTTCTAGGTCCAAAAGAAGCTGCTAAAGTGAGCCTTGTGTGCAAAGCATGGAGATCGCTGGTCTCCGATAATCGCCTCTGGATTTTCTTCCTTCAGACCCACCAAACAGAGCCATGGGATTCCATTTTTTTCGCCGAGATCAATTTGAGGTCCGGTTACCCTCTTCCAACCTGTGTATTCGAGATGCCTCAGTTATCTTTCAAGCGTATATATGACCTACGAGCACAAGTTCCTGGTTCTGTTATCATAGATGGAGGTTCTGGCTATTGCAAGTTTGGTTGGAGCAAATACCCCTGCCCATCAGGACGCTCGGCAACCTTCTTGGAATTCGGTAACATTGAGTCTCCGATGTACCCTAGACTAAGACATTTTTTCGGAACTATTTATAGCAGGATGCAGGTCAAACCAAATACTCAACCAGTCATTGTTTCTTTACCAATATGCCATTATGACGATACTGAATCTGCTAAAGCATCAAGACGGCAGCTTAAGGAGGCAATATATGCTGCCCTGTTTGACATGAACGTTCCTGCTATTTGTGCTGTAAACCAGGCCACTTTAGCTCTCTATGCTGCAAAACAAACTTCTGGAATAGCTGTTAATATTGGTTTTCAGGTCGCATCTATAGTTCCAATTCTAAATGGTAAAGTTATGCGCAAGGTGGGTGTGGAAGTCATGGGACTGGGAGCACTAAAACTTACAGGATTCCTTAGGGAGCTGATGCAACAGAACAACATGAATTTTGAATCTCTGTACACTGTTCGCACACTAAAAGAGAAGCTATGCTATGTTGCTATTGATTATGAAGCTGAGCTATCAAAAGATACACAAGCATCATTTGAAGCTCAAGGGGAAGGATGGTTTACACTTTCGAAAGAGCGGTTTCAAACAGGAGAGATCTTGTTTAAGCCTCGGCTTGCTGGGTTGCAAGCAATGGGTTTACACCAGGCCGTAGGTCTTTGTATGGACCATTGCTATTCTGCAGAATTAGCAGGCGACCCTGATTGGTTTAAGACTGTAGTTTTATCTGGGGGGACTGCATGTTTACCGGGTCTGGCAGAAAGGTTAGAAAAAGAACTCCTCGAGTTACTTCCTCCCCACGTGTCCAATGGAATCAAAGTCATCCCTCCTCCATATGGTGCTGATACTGCATGGTTTGGAGCAAAGACTATTGGCAATTTGAGCACCTTTCCTGGTCCGTGGTGTATAAAGAAGAAGCAGTTCCATCGCAAGTCTAGACGCAACAATCTCATATGGTGA 1413 0.4473 MALLLRKVWESVSNRPTSGSISNSTERVRCVDSPLGAFEQIPSDILIQILRFLGPKEAAKVSLVCKAWRSLVSDNRLWIFFLQTHQTEPWDSIFFAEINLRSGYPLPTCVFEMPQLSFKRIYDLRAQVPGSVIIDGGSGYCKFGWSKYPCPSGRSATFLEFGNIESPMYPRLRHFFGTIYSRMQVKPNTQPVIVSLPICHYDDTESAKASRRQLKEAIYAALFDMNVPAICAVNQATLALYAAKQTSGIAVNIGFQVASIVPILNGKVMRKVGVEVMGLGALKLTGFLRELMQQNNMNFESLYTVRTLKEKLCYVAIDYEAELSKDTQASFEAQGEGWFTLSKERFQTGEILFKPRLAGLQAMGLHQAVGLCMDHCYSAELAGDPDWFKTVVLSGGTACLPGLAERLEKELLELLPPHVSNGIKVIPPPYGADTAWFGAKTIGNLSTFPGPWCIKKKQFHRKSRRNNLIW 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2102 470 Pfam F-box-like 39 78 IPR001810 GO:0005515
Bisa05g2102 470 Gene3D - 236 434 - -
Bisa05g2102 470 SMART fbox_2 41 81 IPR001810 GO:0005515
Bisa05g2102 470 Gene3D Actin; Chain A, domain 4 279 362 - -
Bisa05g2102 470 SMART actin_3 129 459 IPR004000 -
Bisa05g2102 470 SUPERFAMILY Actin-like ATPase domain 131 251 IPR043129 -
Bisa05g2102 470 Gene3D - 178 461 - -
Bisa05g2102 470 Pfam Actin 178 456 IPR004000 -
Bisa05g2102 470 Gene3D - 32 104 - -
Bisa05g2102 470 SUPERFAMILY F-box domain 35 97 IPR036047 GO:0005515
Bisa05g2102 470 PANTHER ACTIN 174 462 IPR004000 -
Bisa05g2102 470 ProSiteProfiles F-box domain profile. 35 81 IPR001810 GO:0005515
Bisa05g2102 470 SUPERFAMILY Actin-like ATPase domain 246 456 IPR043129 -
Bisa05g2102 470 CDD F-box_AtARP8-like 37 81 - -
Bisa05g2102 470 CDD NBD_sugar-kinase_HSP70_actin 132 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2102 Bisa-ChrBisa05 46721732 46729432 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2102 178 457 Cytoskeleton Gene Families AT3G12110 31.488 1.14e-39 145