Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2078 ATGAACGACTCTGCGTACAGAGTGGAAACGACATCCCGTCTCGCCCAATGGACAATCCACAACCTGACTTCCTGGAATTTCCGCAAGTCCGACCCTTTCAAGATCGGCATGTGGAACTGGCATTTGTCGGTGGAAAAAAACCGGGTTTTGCTCGTGAAATTGTACCCAGAAGTATCCAGTGTAACCAGAGATAATCCCCCCTCTGTATCTTTCATCATGAAGATTGTTAGTGCTGCTCGAGATCGCAAGGCCTTGATCCATCCAGAGGTAAAAGACAAACTGCTCAAGAACAACGAAGACTTTGTTTGGGCAATCGAGGCTCCATTAACAGGGAAATTCACTATTGAGGTTGAGTTCCTTGACTTAAAGACGGCATCTTCAAAGGGTGGTGAAGAACCTCGCTCCATATGGGATGCTGAATTTATGCAAAAAAGATTAAATTCAACAGCCTTTCAATCTCTTGGTCAAATGCTAACACAAAGAATCCTCACAGACATCATGATCAACGCTTCAGATGGAAGCATCGAAGCACATCGTGCTGTTCTAGCAGCTCGATCACCTGTCTTTTGCAGCATGTTGTCACATGATCTTAAGGAGGAGGAGCTACCTGCCATAGACTTATCAAACATGTCAGTTGAAGCTTGCCAAGCTTTTCTCAATTATCTCTATGGGAACATCAAGCATGAAGACTTTTTAAGGCACAGGCTTGTCCTTCTTCATGCAGCAGATAAGTATGACATAGTTGACTTGAAAGAGGCATGCCTTGAGAGTCTTTTAGAAGATATTGATTCAAATAATGCTCTTGAGAGGCTCCAGAGTGCATCTTTATATCAATTGCCCAAACTGAAGATGAGTTGCATACGGTATCTTGTGAAATTCGGCAAATTATATGATATTCGGGATGACTTAAGTGCCTTCATACAATGTGCAGATAGGGATCTGATTGCTGAAATCTTCCATGAAGTTCTCAATTCCTGGAGAGGATTTTGA 990 0.4283 MNDSAYRVETTSRLAQWTIHNLTSWNFRKSDPFKIGMWNWHLSVEKNRVLLVKLYPEVSSVTRDNPPSVSFIMKIVSAARDRKALIHPEVKDKLLKNNEDFVWAIEAPLTGKFTIEVEFLDLKTASSKGGEEPRSIWDAEFMQKRLNSTAFQSLGQMLTQRILTDIMINASDGSIEAHRAVLAARSPVFCSMLSHDLKEEELPAIDLSNMSVEACQAFLNYLYGNIKHEDFLRHRLVLLHAADKYDIVDLKEACLESLLEDIDSNNALERLQSASLYQLPKLKMSCIRYLVKFGKLYDIRDDLSAFIQCADRDLIAEIFHEVLNSWRGF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2078 329 SUPERFAMILY POZ domain 146 260 IPR011333 -
Bisa05g2078 329 ProSiteProfiles BTB domain profile. 164 223 IPR000210 GO:0005515
Bisa05g2078 329 Gene3D Potassium Channel Kv1.1; Chain A 139 292 IPR011333 -
Bisa05g2078 329 PANTHER OS08G0495500 PROTEIN-RELATED 5 328 IPR044714 -
Bisa05g2078 329 SMART BTB_4 164 262 IPR000210 GO:0005515
Bisa05g2078 329 CDD BTB_POZ_ZBTB_KLHL-like 163 245 - -
Bisa05g2078 329 Pfam BTB/POZ domain 156 260 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2078 Bisa-ChrBisa05 45787299 45793654 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bisa05g2078 BTB 1.3e-19 CL0033