Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2060 ATGGATTCAGGGTCCATGGTTTCAATTGCGTCAAACTCTCCAGCAAGAGAAGATAGAACAATGGGCAGTGCCAGAAACAGGCCTTCTCAAGCTTCAAGGCCTTCCTTTTTGATCCAATTGGCGATGAGAATATCCAGAGCAAGATGGTTCATCTTCTTAAGAAGAGTCTTCCATTACCAAAATGGATCAAGCTCTGATCTTGGGTCCAACCCTTTCAATTCTGGCACCTGGATGATGCTGGAGTTCACTGCTTTGATGGTCCAGATAATCCTCACAACCTTCACTTTGGCCATCTCAAAGAAGGAGACACCTATTTGGCCTATGAGGGTATGGATTTCTGGGTATGATATTGGCTGTGTGCTTAATCTGCTTCTCCTTTGTGGCCGATTTCGTCAGCTTTATCTGTCTCAAGGCGATGCTCTTAGCCTTTCTGATATGGAAAACCAGAGAGCCAATCAAGAAACCAGGTGCTCAGGTTTGATGAACAAATGCCGGACCTCACTTGAGCTTTTCTTCGCCATATGGTTTGTGATGGGCAATGTGTGGGTTTTCGACTCACGTTTTGGGTCTTTTCAAAGAGCTCCGAAACTCCATGTGCTCTGCGTCTCTCTGCTTGCTTGGAACGCCATCTCATACTCCTTCCCTTTCCTTCTCTTCCTTCTACTATGCTGCTGTGTGCCTCTCCTCAGCACCCTCCTCGGTTACAACATCAACATGGCCTCCTCTGCTAAAGGGGCTTCTGATCATCAAATCTCATTGCTTCCATGTTGGAGGTATAAGCATGTCCACGCCCATGATTCTGAACCCACTCAACCTGGGATTGTCAATCAACATCCTGAATGCTGCATTTGCTTAGCCAAGTATAAAGACACAGAGGAAGTTAGGCAGTTGCCATGTTCCCATGTGTTTCACCTAAAATGTGTGGATCAATGGCTGAGAATCATATCCAACTGCCCTCTCTGTAAACAAGGATTATAG 978 0.4591 MDSGSMVSIASNSPAREDRTMGSARNRPSQASRPSFLIQLAMRISRARWFIFLRRVFHYQNGSSSDLGSNPFNSGTWMMLEFTALMVQIILTTFTLAISKKETPIWPMRVWISGYDIGCVLNLLLLCGRFRQLYLSQGDALSLSDMENQRANQETRCSGLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPKLHVLCVSLLAWNAISYSFPFLLFLLLCCCVPLLSTLLGYNINMASSAKGASDHQISLLPCWRYKHVHAHDSEPTQPGIVNQHPECCICLAKYKDTEEVRQLPCSHVFHLKCVDQWLRIISNCPLCKQGL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2060 325 Coils Coil 143 163 - -
Bisa05g2060 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 325 IPR013083 -
Bisa05g2060 325 Pfam Ring finger domain 280 322 IPR001841 -
Bisa05g2060 325 SUPERFAMILY RING/U-box 280 323 - -
Bisa05g2060 325 SMART ring_2 281 321 IPR001841 -
Bisa05g2060 325 ProSiteProfiles Zinc finger RING-type profile. 281 322 IPR001841 -
Bisa05g2060 325 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 7 324 - -
Bisa05g2060 325 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2060 Bisa-ChrBisa05 45180576 45184341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2060 28 325 C3H Transcription Factor Family AT4G26580 68.000 1.06e-141 402