Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2040 ATGGCGGACTCGGACAACGATTCCGGAGGCGCACAGTACGCCGCGAACAATGCTAACAGCGGCGATACTTCCCTGCGAGAGCAAGACCGGTTTCTTCCGATAGCGAACGTGAGCAGGATCATGAAAAAGGCTCTGCCAGCGAATGCGAAGATCTCAAAGGACGCGAAGGAGACAGTGCAAGAGTGCGTATCGGAGTTCATCAGCTTCATCACCGGCGAGGCCTCGGACAAGTGCCAGAGGGAGAAGCGGAAGACCATCAATGGCGACGATTTGCTGTGGGCGATGACGACGTTGGGATTCGAGGAGTACGTGGAGCCGCTCAAGATATACCTTCAGAGGTTCAGGGAAATGGAAGGGGAGAAGAGCGTGGGGGCGCGTGACAAGGACGGAGGGGCTGGAGGCGCGAACGCCGCGAATAGTGGCTTCGACGGGGGTGCTGGTGGTGGTGGTGGGATGTACGGGGGGATGATGATGCATCAAGGACACGTGTATGGTTCTGCTGGGTTTCATCCAATGGCTTTGAGCAGTGGAAGTGGTGGTCCTGTGACGGGTAAGAGTGGACCTGGTTATCCCGGTGCTGGATCTACTGCAAGGAGACCCGGATAG 606 0.5743 MADSDNDSGGAQYAANNANSGDTSLREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREMEGEKSVGARDKDGGAGGANAANSGFDGGAGGGGGMYGGMMMHQGHVYGSAGFHPMALSSGSGGPVTGKSGPGYPGAGSTARRPG 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2040 201 MobiDBLite consensus disorder prediction 122 141 - -
Bisa05g2040 201 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 95 IPR003958 -
Bisa05g2040 201 MobiDBLite consensus disorder prediction 1 26 - -
Bisa05g2040 201 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 5 128 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa05g2040 201 FunFam Nuclear transcription factor Y subunit B-3 20 142 - -
Bisa05g2040 201 PRINTS CCAAT-binding transcription factor subunit A signature 78 96 - -
Bisa05g2040 201 PRINTS CCAAT-binding transcription factor subunit A signature 59 77 - -
Bisa05g2040 201 PRINTS CCAAT-binding transcription factor subunit A signature 97 115 - -
Bisa05g2040 201 MobiDBLite consensus disorder prediction 1 27 - -
Bisa05g2040 201 ProSitePatterns NF-YB/HAP3 subunit signature. 62 78 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bisa05g2040 201 MobiDBLite consensus disorder prediction 174 201 - -
Bisa05g2040 201 Gene3D Histone, subunit A 19 140 IPR009072 GO:0046982
Bisa05g2040 201 SUPERFAMILY Histone-fold 28 128 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2040 Bisa-ChrBisa05 44868561 44869166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2040 1 125 CCAAT-HAP3 Transcription Factor Family AT4G14540 83.200 2.19e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa05g2040 CBFD_NFYB_HMF 1.9e-27 CL0012