Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2039 ATGGGAAGGGTGATGGAGAATCCCTCAAAAGAAGAGGAGGAAACGGAAATCATATTTCGCAGTCGACATTCCGGCGTGCCCATTCCCGAGAACATGACGCTTCCGGAGTTCGTTCTGGAGAAGGCGGAGTTATACGCCGACAAGGTGGCGTTTGTGGAAGTTGGGAGTGGAAAGCGAATCACGCACGGTGAAGTGGCGAGGGACACAGAGAGGTTTGCCAAGGCCCTGCGTTCTCTGGGTCTCAGAAAGGGCAATGTCGTCATTGTGGTGCTTCCCAATGTGGCAGAGTACGCCATTATCGCTTTGGGCATAATGGTGGCTGGTGGCGTCTTTTCCGGTGCCAATCCAACCGCTCATGTTTCTGAAATCAACAAACAAGCACTCTCCGCTGATGCCAAGTTGATTGTTACCAACGCCCTCAACTATGAAAAGGTGAAAGGTCTAGGCCTACCCGTGATTGTGCTAGATGATGAACCCATTGAAGACGCCATGAGCTGGAAAAAACTGCTGGAAGCTGGAGATCGAGCTGGGCATAGTCCGATAAAGGAAGCCGTGGAGCAGACGGATCTGTGTGCCTTGCCTTTCTCATCAGGAACCACAGGAATGTCAAAAGGCGTGATGCTGACCCACAGAAACCTAGTAGCCAATCTCTGCTCTACACTCTTCGGTGTGGAGCAAGACATGGTGGGTCAGGTCACAACACTAGGCCTAATCCCATTCTTCCACATCTATGGCATCTCTGGAATCTGTTGCGCCACTCTTAGAAACAAAGGGAAAGTGGTTGTGATGGGAAGGTTCGAGTTAAGGACGTTTCTGAATGCGTTGATCGCCCATGAGGTCACATTCGCACCCATAGTGCCCCCAATCATTCTGACCTTGGTCAAGAACCCCATTGTGGATGAGTTCGATCTCACCAAGCTCAAACTCCAAGCAATTTTGACTGCAGCTGCGCCCCTTGCGCCTGAACTACTCACTGCCTTTGAAAATAAGTTTCCTGGTGTTCTTGTCGAAGAAGCATATGGGCTAACTGAACATAGCTGCATCACACTCACCCATATACAAAAAGGATTTGGGGACCCAAAAAGAAACTCAGTGGGGTTCATCCTCCCCAATTTGGAAGTCAAATTTATTGACCCTGACACTGGTACATCTCTCCCAAGGAACACGCCTGGTGAGCTGTGTGTGAGAAGTCAATGCGTAATGCGAGGTTACTACAAGCAAGAGGATGAGACTGCACAGACAATTGATAAGAAAGGTTGGCTTCACACTGGTGACATAGGACTTATAGATGATGATGACAATGTATTTATTGTTGATCGTATCAAGGAGTTGATTAAATACAAAGGCTTCCAAGTTGCTCCTGCTGAGCTAGAGGCCATACTTCTATCTCATTCCTCTGTTGAAGATGCAGCTGTTGTACCATTAGCAGATGAAGAGGCTGGGGAGATCCCAGGGGCAAGTGTAGTGATGATCTTAGGAGCAAAAGAGAGTGAAGAAGACATGATGAATTATGTTGCGTCTGATGTGGCACATTACAAGAAAGTGAGAGTGGTGCACTTTGTTGAAGCCATCCCTAAGTCTCCTTCTGGCAAGATTATGAGGAGGCTTGTAAAAGAGAGAATGATGGAGAGGATACGTTCACAATCTCCAACTACACCCAACACTGCCTAA 1671 0.4806 MGRVMENPSKEEEETEIIFRSRHSGVPIPENMTLPEFVLEKAELYADKVAFVEVGSGKRITHGEVARDTERFAKALRSLGLRKGNVVIVVLPNVAEYAIIALGIMVAGGVFSGANPTAHVSEINKQALSADAKLIVTNALNYEKVKGLGLPVIVLDDEPIEDAMSWKKLLEAGDRAGHSPIKEAVEQTDLCALPFSSGTTGMSKGVMLTHRNLVANLCSTLFGVEQDMVGQVTTLGLIPFFHIYGISGICCATLRNKGKVVVMGRFELRTFLNALIAHEVTFAPIVPPIILTLVKNPIVDEFDLTKLKLQAILTAAAPLAPELLTAFENKFPGVLVEEAYGLTEHSCITLTHIQKGFGDPKRNSVGFILPNLEVKFIDPDTGTSLPRNTPGELCVRSQCVMRGYYKQEDETAQTIDKKGWLHTGDIGLIDDDDNVFIVDRIKELIKYKGFQVAPAELEAILLSHSSVEDAAVVPLADEEAGEIPGASVVMILGAKESEEDMMNYVASDVAHYKKVRVVHFVEAIPKSPSGKIMRRLVKERMMERIRSQSPTTPNTA 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2039 556 FunFam 4-coumarate--CoA ligase 2 443 544 - -
Bisa05g2039 556 FunFam Long-chain-fatty-acid--CoA ligase FadD 20 442 - -
Bisa05g2039 556 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Bisa05g2039 556 SUPERFAMILY Acetyl-CoA synthetase-like 14 547 - -
Bisa05g2039 556 CDD 4CL 28 535 - -
Bisa05g2039 556 Pfam AMP-binding enzyme 40 447 IPR000873 -
Bisa05g2039 556 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Bisa05g2039 556 Gene3D - 443 546 IPR045851 -
Bisa05g2039 556 Gene3D - 16 442 IPR042099 -
Bisa05g2039 556 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2039 Bisa-ChrBisa05 44846276 44853519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2039 9 542 Monolignol Biosynthesis Gene Families AT1G62940 73.134 0.0 786