Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2036 ATGGAGGCCGCTACCAACCCTGTTGAGCACCACTCCGATTCGGAGCTCCGGTTCCGGGATTCCGACGATGGGGCATCTTTTGATCCGAATCAACTCGGGTCACGGCGGAATTCGGACGCCGGAGTTGCTTCCTCCAGCAATGGAGGCGCGAGGTACAAGCTCATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCCCGTATTACGATACCGCCAGGGCTGAGTCCGACGTCGTTTCTAGAGTCCCCCGTGCTTCTGTCCAACATGAAGGTGGAGCCTTCGCCAACTACAGGATCCTTTTCTAAGCCTCAAGCACTGCTTGGTTCTGTTGCTTCTGCTACATTTCCTGTAACAAGTGTGTGCTTCAATGCCAATACTGTTGATGACAGAAAATCTGGCTTCTTTGAATTTAAATCTCACTGTAGTTCAGATATGGTACCGGCAGATTTTAATGGCCATGTTAGTGAACAGTCCATGCAAATAGATGGTCCAGGCCAGGCTCAATCATATGCCTCATTAGTTAAAAGTGAGATACCAGTGCCCTCAAATGAATTAAGTTTATCATCACCTGTTCAAATGGTTAGCTCAGGGGCCAGTACCCCTGTTGAAGTTGATCTGGATGAATTCAAAGCCACTGGGCTTCAAGCATCTCAAGTTGAGGGTAGAGGCAGTGGCATTTCAGCTGCAGCTGAGAGAGTATCTGATGATGGATACAATTGGCGGAAATACGGACAGAAACACGTTAAAGGAAGTGAATTTCCACGCAGCTATTACAAATGCACGCATCCAAATTGTGAAGTAAAGAAATTATTTGAACGCTCTCATGATGGGCAAATCACAGAGATAATTTACAAGGGAAAACATGATCATCCTAAACCTCTACCTAGCCGCCGATATTCTGCTGGTACCATGATGTCTGTGCAAGAAGAGAGATCTGACAAGGCTTTGTCAGCAGGCCAAGATGACAAAGCATCCAATATGTACGGTCACGTGCCTCACACTGCTGAGCCCAACAGTATTCCAGAGCTATCTCATGCACCCACAAATGATGATAGTCCAGAGGGTGTTGGGTCAGTGTCAAATAGGGTTATCGATGAGGTTGATGATGATGATCCCTTCTCAAAACGAAGGAAAATGGACATTGGAAATGCTGACATCACTCCCATAGTTAAGCCTATCCGGGAACCACGGGTTGTTGTACAAACGCTGAGTGAGGTTGACATATTGGATGATGGTTATCGCTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACTAATGCTGGTTGCCCCGTTAGAAAACACGTGGAGAGGGCATCTCATGATCCCAAAGCAGTAATAACCACATACGAGGGTAAACACAATCACGATGTGCCTACTGCAAGGAGTAGTAGCCATGACATGGCAGGACCAGCAGCTGTGGGTGGGCAGACCAGAATTAGATCAGAAGAAACTGATACCATTAGCCTTGACCTCGGGATGGGCATTAGCTCAGCTGCTGAAAATAGGTCGAACAGACAAGGGCAAATGCTGCTCTCTGAATTCGGCAACAGTCAAACTCACTCCAGCAATTCCAGTTTCAAGTTTGTTCATACTGTCCCAGTACCGGCATACTTTGATGTTCTTAATAATGGCTCAAATCCATATGGTTCTAGAGAAAATATGAGTGACGGTCCATCTTTAAACCATTCCTCTTACCCACCGAACATGGGACGAGTACTAACGGGTCCATGA 1764 0.4717 MEAATNPVEHHSDSELRFRDSDDGASFDPNQLGSRRNSDAGVASSSNGGARYKLMSPAKLPISRSPRITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSFSKPQALLGSVASATFPVTSVCFNANTVDDRKSGFFEFKSHCSSDMVPADFNGHVSEQSMQIDGPGQAQSYASLVKSEIPVPSNELSLSSPVQMVSSGASTPVEVDLDEFKATGLQASQVEGRGSGISAAAERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGKHDHPKPLPSRRYSAGTMMSVQEERSDKALSAGQDDKASNMYGHVPHTAEPNSIPELSHAPTNDDSPEGVGSVSNRVIDEVDDDDPFSKRRKMDIGNADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARSSSHDMAGPAAVGGQTRIRSEETDTISLDLGMGISSAAENRSNRQGQMLLSEFGNSQTHSSNSSFKFVHTVPVPAYFDVLNNGSNPYGSRENMSDGPSLNHSSYPPNMGRVLTGP 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2036 587 MobiDBLite consensus disorder prediction 559 587 - -
Bisa05g2036 587 FunFam WRKY transcription factor 224 294 - -
Bisa05g2036 587 FunFam WRKY transcription factor 33 396 462 - -
Bisa05g2036 587 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 510 IPR044810 GO:0003700
Bisa05g2036 587 MobiDBLite consensus disorder prediction 341 356 - -
Bisa05g2036 587 ProSiteProfiles WRKY domain profile. 404 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2036 587 MobiDBLite consensus disorder prediction 465 489 - -
Bisa05g2036 587 Gene3D WRKY domain 394 470 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g2036 587 Gene3D WRKY domain 226 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g2036 587 MobiDBLite consensus disorder prediction 1 24 - -
Bisa05g2036 587 Pfam WRKY DNA -binding domain 410 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2036 587 Pfam WRKY DNA -binding domain 235 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2036 587 SMART WRKY_cls 409 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2036 587 SMART WRKY_cls 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2036 587 MobiDBLite consensus disorder prediction 363 378 - -
Bisa05g2036 587 ProSiteProfiles WRKY domain profile. 229 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g2036 587 SUPERFAMILY WRKY DNA-binding domain 232 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g2036 587 MobiDBLite consensus disorder prediction 559 579 - -
Bisa05g2036 587 MobiDBLite consensus disorder prediction 27 50 - -
Bisa05g2036 587 MobiDBLite consensus disorder prediction 1 50 - -
Bisa05g2036 587 MobiDBLite consensus disorder prediction 283 378 - -
Bisa05g2036 587 SUPERFAMILY WRKY DNA-binding domain 401 469 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2036 Bisa-ChrBisa05 44700077 44705698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2036 55 587 WRKY Transcription Factor Family AT4G26640 58.011 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa05g2036 WRKY 1.5e-25 CL0274