Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2031 ATGACATTTATCTTCCCACGCCACTCTCTAACGTACTCCGCCATGGGTCTCCTCCTAAAACCCGTTTTCTTACACTTATTGTCTGGTTCTCTCCACCTAGTTTTGTTAGTAGCATTTTTAGTCTCATGGGTGTGGAATAAAATCCCACTGGGAGCCAGAGATGATTCCAACGGAAAATTCAAGAGCACTCTTAATACGAGGACTCTGTTATTTCCGTTGGGCGCTTCTGTTTTTAATCTTGTTGCATGTCTAGTGTATTACTTTTATTGGTATAGAAATGGATGGTCAGACGAAAAACTCGTGACCCTTATGGATTTAGCACTTAAAACTGTTGCTTGGGGTGTCGTTTGTGCTTACTTAAATACAGGGTTCTTCAATTCGGGCGAAAAGAAGTTTCCGTTGTTCTTCAGAGCTTGGTGCGCTTTCTACCTTCTTATTTCCTGTTACTGCTTCATACTGGATATCATTTTCTATGAAAAATACGCTTCCTTACCTCTGATTTCTGATGGTGTCTCCTTTTCTGTGAGTTTATTTTTCTGTTACATGGGGTTCTTTTTGAAAAATGAGGGTAAAGATAGCGTTCTTCAAGAATCTCTCTTGGATGGTAATACTGATGTTTGTAATGCGTCAGAGTCATTTAAGACCAAGGGGGCAGATATTGTTACCCCTTACTCAAATGCTGGAATTTTCAGCTTTCTTAGCTTCTCTTGGATGGGTCCTTTGATTGCTGCTGGTAAAAAGAAGACTCTAGACCTCGAGGATGTCCCACAACTAGCTAGTTTTGACAGTGTAGCTGGAGCTTTTCCAAGCTTCAGAAATAAACTTGAGGCAGACTGTGGTGCAATAAACAAGGTGACCACACTTAAGCTGCTTAAGTCATTAATGCTCTCAGCGTGGAAGGAGATTTTTGCAACAGCTGTTTTAGCATTTTTAAATACAGTGGCTTCTTATGTTGGTCCATATCTCATTGACACTTTCGTTCAATATCTCAATGGAAAACGAAAGTTTAAGAATGAGGGATACCTTTTGGTGTCTGCATTTTTTGTTGCAAAGCTTATAGAGTGCCTGACACTGAGGCACTGGTTCTTTAAGCTGCAGCAAATTGGAATTAGGATCCGAGCACTGCTTGTGACAATCATCTATAGTAAGGGTTTGACCCTTTCATGTCAGTCCAAGCAGGGCTACACTACTGGGGAAAAAATCAATTTCATTACGGTTGATGCTGAAAGAGTTGGCGACTTCAGTTGGTATATGCATGACCTTTGGCTGGTAGTTCTGCAAGTTGCATTGGCCCTGTTTATTTTGTATAAAAATCTTGGAGTGGCTTCGATTTCAGCTTTTGTTGCAACTGTTATTATAATGCTGGCAAATGTTCCCCTGGGATCATTGCAAGAGAAGTTTCAAGAGAAGTTGATGGAGTCAAAAGATAGAAGAATGAAGGCCACGTCTGAGATTTTAAGGAACATGAGAATTCTCAAACTACAGGGGTGGGAGATGAAGTTTCTGTCTAAGGTTATTGAACTGAGGAAGACAGAGCAAAGCTGGTTAAAGAAATATGTTTATACTTCAGCTATAACCACATTTGTCTTTTGGGGTGCTCCCACCTTTGTATCTGTGGTTACTTTTGGTACCTGCATGCTTCTTGGGATCCCACTTGAATCAGGGAAGATCTTATCTGCACTTGCAACGTTCGGCATACTTCAAGAGCCCATATATAATCTTCCAGACACAATATCAATGATAGCACAGACTAAGGTATCTCTTGACAGGATTGCATCATTCCTTCGTCTTGATGACTTGCAATATGATGTTATAGAGAAGCTTCCAAGGGGTAGTTCTAATAGGGCAATTGAGATAGTTGATGGTAATTTCTCTTGGGATTTATCCTCTCCTAGTTCAGCATTGAAAGATATAAATCTCACTGTCTTTCATGGCATGAGAGTTGCTGTTTGTGGTACTGTTGGCTCAGGCAAGTCTAGTCTACTATCCTGTATTTTGGGAGAAGTGCCAAAGAATTCAGGAATCCTGAGGGTGTGTGGAACAAAGGCCTATGTTGCTCAGTCTCCATGGATACAAAGTGGCAAGATTGAAGAGAATATATTGTTTGGAAAGGAGATGGAGAGGGAAAGGTATGAGAAGGTCCTTGAAGCATGCTCCCTGAAGAAGGACCTTGAGATTTTGTCATTTGGTGATCAGACAATTATAGGAGAGAGGGGAATCAATTTGAGTGGTGGACAGAAACAAAGAATACAACTCGCACGTGCTCTTTACCAAGATGCTGACATATATCTGTTAGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCCCACCTCTTTAAGGACTGTTTACTGGGCCTTTTAAGTTCAAAGACAGTTATTTATGTCACACATCAAGTAGAGTTCTTACCTGCTGCTGACCTTATCTTGGTAATGAAAGATGGGAAGATTACTCAATGTGGAAAGTATAATGATTTGCTCAACTTAGGGAGCGATTTCATGGAACTTGTTGGTGCACATAAAAAAGCTTTGTCTGCACTTGATTCATTGGATGGAGAGGAAGTATCTGATCAAGTAAGTACAGCAGAACCAGAAGTAAATGTCTCCGATGCACAAGTTATAGAAGAAAAAGTGGCAAACAAAGATATGCGAAATGGTAAAACAGATGTAGTTGAACCAAAAAGCCAGCTTGTTCAAGAGGAAGAAAGGGAGAAGGGCAGGGTTGGGTTTTCGGTGTATTGGAAATATATAACAACCGCATATGGAGGAGCTCTTGTACCATTTATATTGTTGGCACAAATTCTATTTCAACTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCCATTTCTTCAGATGTGAAACCACCTGTTGGAGCCTATACACTTATAATTGTCTATGTTGTCATGGCCATAGGAAGTGCTTTCTGCATTCTTGCAAGAGCAATGCTTCTTTCCACAGCTGGTTATAAGACAGCTACTCTTCTATTCACTAAAATGCACTTGTGCATTTTCCGTGCGCCTATGTCATTTTTTGATGCCACTCCAAGTGGACGAATCATTAACAGGGCTTCTACGGACCAAAGTGCCGTGGATATAGGCATTCCTTATCAAGTTGGTTCATTTGCCTTCTCTATGATTCAGCTCCTGGGAATTATAGCGGTGATGTCGCAGGCTGCATGGCAGGTTTTCATCATCTTTATTCCTGTGATATCAATCAGCATTTGGTATCAGCAATATTATTTACCATCAGCCCGAGAACTATCACGGTTAGTTGGAGTATGCAAAGCTCCAGTCATTCAACACTTTTCTGAAACAATTTCAGGCACAACAACCATTAGAAGCTTTGATCAAGAGTCAAGATTTCAGAAAACAAATATGGAACTGATGGATGGATATTCTCGGCCGAAGTTCAATATCGCTGGTGCTATGGAATGGCTGTGCTTCCGCTTGGATATGTTGTCTGCTATTACATTTGCGTTTTCCTTGATATTTTTGATATCTATACCACAGGGAGTCATAGATCCAGGTCTTGCTGGTTTAGCTGTTACATATGGACTTAATTTGAACATAATACAAGCTTGGGTGATATGGAATCTTTGCAACTTGGAGACCAAAATTATATCTGTAGAAAGAATACTTCAGTACACTTGCCTTCCAAGTGAGCCTCCTCTTGTTATAGAAGAAAACCGACCCAATCCTTCTTGGCCGCCACATGGAGAAGTTGATATTTATGATTTGCAGGTTCGTTATGCCCCACATCTGCCGCTTGTGTTGCGTGGTATCACGTGTAAATTTCCCGGGGGACTGAAAACTGGCATAGTTGGGAGAACAGGAAGCGGTAAATCAACTCTAATACAAGCACTTTTCCGGATCATTGAGCCAACTGCTGGGCAAATTACGATTGACGGCATCAACATCTCTTCAATTGGACTCCATGATTTGAGGTCTAAACTCAGTATTATTCCTCAAGATCCAACTATGTTTGAAGGGACAGTAAGAAGTAACCTGGATCCATTGGAAGAGTACACAGATGAACAAATTTGGGAGGCTCTGGATAAGGTTCAACTCGGAGATGAGGTTCGAAAGAAAGAAGGAAAGCTAGATTCTGCGGTTAGTGAGAACGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTGTGCCTTGGTAGGGTGCTGCTTAAGAGAAGTAAGGTGTTGGTGCTCGATGAAGCTACTGCGTCAGTCGATACAGCCACAGATAATTTGATTCAGCAAACTCTTAGGCAGCATTTCTCTAACTGTACAGTCATTACCATTGCACATCGAATAACTTCAGTTCTTGACAGTGATATTGTTCTGCTTCTCAATCAAGGACTTATTGAGGAGTGTGACTCTCCGGCTAAATTGCTAGAGGACAAGTCATCTTCTTTTGCCCAACTTGTTGCAGAGTATACCATGCGATCGAAGTCCCCTTTTGAGTAA 4476 0.412 MTFIFPRHSLTYSAMGLLLKPVFLHLLSGSLHLVLLVAFLVSWVWNKIPLGARDDSNGKFKSTLNTRTLLFPLGASVFNLVACLVYYFYWYRNGWSDEKLVTLMDLALKTVAWGVVCAYLNTGFFNSGEKKFPLFFRAWCAFYLLISCYCFILDIIFYEKYASLPLISDGVSFSVSLFFCYMGFFLKNEGKDSVLQESLLDGNTDVCNASESFKTKGADIVTPYSNAGIFSFLSFSWMGPLIAAGKKKTLDLEDVPQLASFDSVAGAFPSFRNKLEADCGAINKVTTLKLLKSLMLSAWKEIFATAVLAFLNTVASYVGPYLIDTFVQYLNGKRKFKNEGYLLVSAFFVAKLIECLTLRHWFFKLQQIGIRIRALLVTIIYSKGLTLSCQSKQGYTTGEKINFITVDAERVGDFSWYMHDLWLVVLQVALALFILYKNLGVASISAFVATVIIMLANVPLGSLQEKFQEKLMESKDRRMKATSEILRNMRILKLQGWEMKFLSKVIELRKTEQSWLKKYVYTSAITTFVFWGAPTFVSVVTFGTCMLLGIPLESGKILSALATFGILQEPIYNLPDTISMIAQTKVSLDRIASFLRLDDLQYDVIEKLPRGSSNRAIEIVDGNFSWDLSSPSSALKDINLTVFHGMRVAVCGTVGSGKSSLLSCILGEVPKNSGILRVCGTKAYVAQSPWIQSGKIEENILFGKEMERERYEKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQLARALYQDADIYLLDDPFSAVDAHTGSHLFKDCLLGLLSSKTVIYVTHQVEFLPAADLILVMKDGKITQCGKYNDLLNLGSDFMELVGAHKKALSALDSLDGEEVSDQVSTAEPEVNVSDAQVIEEKVANKDMRNGKTDVVEPKSQLVQEEEREKGRVGFSVYWKYITTAYGGALVPFILLAQILFQLLQIGSNYWMAWATPISSDVKPPVGAYTLIIVYVVMAIGSAFCILARAMLLSTAGYKTATLLFTKMHLCIFRAPMSFFDATPSGRIINRASTDQSAVDIGIPYQVGSFAFSMIQLLGIIAVMSQAAWQVFIIFIPVISISIWYQQYYLPSARELSRLVGVCKAPVIQHFSETISGTTTIRSFDQESRFQKTNMELMDGYSRPKFNIAGAMEWLCFRLDMLSAITFAFSLIFLISIPQGVIDPGLAGLAVTYGLNLNIIQAWVIWNLCNLETKIISVERILQYTCLPSEPPLVIEENRPNPSWPPHGEVDIYDLQVRYAPHLPLVLRGITCKFPGGLKTGIVGRTGSGKSTLIQALFRIIEPTAGQITIDGINISSIGLHDLRSKLSIIPQDPTMFEGTVRSNLDPLEEYTDEQIWEALDKVQLGDEVRKKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKRSKVLVLDEATASVDTATDNLIQQTLRQHFSNCTVITIAHRITSVLDSDIVLLLNQGLIEECDSPAKLLEDKSSSFAQLVAEYTMRSKSPFE 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2031 1491 ProSitePatterns ABC transporters family signature. 742 756 IPR017871 GO:0005524|GO:0016887
Bisa05g2031 1491 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 224 1480 - -
Bisa05g2031 1491 SUPERFAMILY ABC transporter transmembrane region 927 1226 IPR036640 GO:0005524|GO:0016020
Bisa05g2031 1491 FunFam ABC transporter C family member 5 602 849 - -
Bisa05g2031 1491 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 617 840 IPR003439 GO:0005524
Bisa05g2031 1491 Gene3D - 1229 1482 IPR027417 -
Bisa05g2031 1491 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 929 1209 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa05g2031 1491 Pfam ABC transporter 635 769 IPR003439 GO:0005524
Bisa05g2031 1491 Pfam ABC transporter 1263 1411 IPR003439 GO:0005524
Bisa05g2031 1491 SUPERFAMILY ABC transporter transmembrane region 291 595 IPR036640 GO:0005524|GO:0016020
Bisa05g2031 1491 CDD ABC_6TM_ABCC_D1 305 591 IPR044746 GO:0140359
Bisa05g2031 1491 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1246 1480 IPR003439 GO:0005524
Bisa05g2031 1491 FunFam ABC transporter C family member 3 1229 1481 - -
Bisa05g2031 1491 CDD ABCC_MRP_domain2 1244 1464 - -
Bisa05g2031 1491 Gene3D ABC transporter type 1, transmembrane domain 281 599 IPR036640 GO:0005524|GO:0016020
Bisa05g2031 1491 Gene3D ABC transporter type 1, transmembrane domain 891 1227 IPR036640 GO:0005524|GO:0016020
Bisa05g2031 1491 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 303 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa05g2031 1491 SMART AAA_5 1272 1457 IPR003593 GO:0016887
Bisa05g2031 1491 SMART AAA_5 644 817 IPR003593 GO:0016887
Bisa05g2031 1491 FunFam ABC transporter C family member 10 286 599 - -
Bisa05g2031 1491 Gene3D - 600 858 IPR027417 -
Bisa05g2031 1491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1236 1476 IPR027417 -
Bisa05g2031 1491 CDD ABC_6TM_ABCC_D2 927 1221 IPR044726 GO:0140359
Bisa05g2031 1491 FunFam ABC transporter C family member 5 891 1227 - -
Bisa05g2031 1491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 614 839 IPR027417 -
Bisa05g2031 1491 CDD ABCC_MRP_domain1 617 817 - -
Bisa05g2031 1491 Pfam ABC transporter transmembrane region 929 1171 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa05g2031 1491 Pfam ABC transporter transmembrane region 303 570 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2031 Bisa-ChrBisa05 44440521 44446591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2031 617 865 Calmodulin-binding Proteins AT2G36910 29.412 2.54e-24 109