Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g2021 ATGCTGCCCTCATCCTTCTCGCTTGCTGGATTTCCTTGGTGGCCATGTCATTCTCATGATTTCCATCAATTGCACTGCTGTCATCATATGCATTCTCATCAGACAAGTCACTGCCATTTCACTCTTGATCCGATTCTTATCAAATACAAGAAGAAGATGATGGTGATGGTGATGGTGATGGTGATGGGGTTATCAGAATATAGGATTTTAGGCTTGTTTGCTTTGGTTTCGATGGTGGGTATATTATTATCAGTAGAGGCAGGAGAAGGTGGTGAAAAAGGGCAAGTGAGGAATTACATTACATGGGAGGATTTGGTGGTGGATGAGATTGGCTTAGCCACAAAATCCAACAATAACAACGATCTTCAAGTAATTGTGGTTGATCAGCTTGGCACCGGACATTCCACGACTGTTCAAGGAGCTGTGGATATGGTGCCGCCTCAAAACAGAGACAGGGTGAAGATATACATTTATCCTGGAATTTACAGAGAAAAGGTGTTGGTGCCAAGGACGAAGCCATACGTGTCATTCATAGGGAGCAGAAATCAAACACATGGCGTGTTGATTACTTGGAACAGTAAGTCATCGGACGTGGGTTCAAATGGCCAAGCATTGGGCACCTACGGCTCCGCAACCATAACAATAGAATCTGATTATTTCTGCGCAAATAGGATTACTTTTGAGAACTCTGTAGTGGCGGAGCCTGGGGGGCATGGAATGCAAGGAGTGGCACTCAGGGTAGACAGTGACAGAGCCATGTTCTATCAAGTTCAAATCTTGGGAACTCAGGACACTCTTTTGGATAATACGGGAACCCATTACTTTCTCAAGTGCTACATCCAAGGGAAAATTGATTTTATTTGTGGCACCGCAAAATCACTTTATGAGGATTGTCGTCTAAAGTCAATAGCTGAGAACCATGGGGCAATTGCCGCTCATCACAGAGACACGCCCTATCAAGAGACAGGGTTTTCTTTTGTAGGTTGCTCAATCCAAGGAACTGGTAAGGTCTACCTTGGGAGGGCTTGGGGAGACTATTCAAGAATAATATACTCAGACTGTTATATGGATGATATTATTACACCAGAAGGATGGACTGAATGGAATCACCCCTCTAGAAAGATGACTGCAGTTTTTGGGGAGTTCCAATGCAGAGGAAAAGGAGCAGATAGAAGTGGCAGGGTACCCTGGTCAAAATCTTTCACCTATGAGGAAGCAAGGCCTTTTCTCAACAAGAGCTTCATAAATGGAGACCAATGGCTAAGACTATAG 1272 0.441 MLPSSFSLAGFPWWPCHSHDFHQLHCCHHMHSHQTSHCHFTLDPILIKYKKKMMVMVMVMVMGLSEYRILGLFALVSMVGILLSVEAGEGGEKGQVRNYITWEDLVVDEIGLATKSNNNNDLQVIVVDQLGTGHSTTVQGAVDMVPPQNRDRVKIYIYPGIYREKVLVPRTKPYVSFIGSRNQTHGVLITWNSKSSDVGSNGQALGTYGSATITIESDYFCANRITFENSVVAEPGGHGMQGVALRVDSDRAMFYQVQILGTQDTLLDNTGTHYFLKCYIQGKIDFICGTAKSLYEDCRLKSIAENHGAIAAHHRDTPYQETGFSFVGCSIQGTGKVYLGRAWGDYSRIIYSDCYMDDIITPEGWTEWNHPSRKMTAVFGEFQCRGKGADRSGRVPWSKSFTYEEARPFLNKSFINGDQWLRL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g2021 423 Pfam Pectinesterase 125 418 IPR000070 GO:0030599|GO:0042545
Bisa05g2021 423 Coils Coil 423 423 - -
Bisa05g2021 423 Gene3D - 120 423 IPR012334 -
Bisa05g2021 423 SUPERFAMILY Pectin lyase-like 124 421 IPR011050 -
Bisa05g2021 423 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 106 422 - -
Bisa05g2021 423 FunFam Pectinesterase 120 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g2021 Bisa-ChrBisa05 44105600 44111682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g2021 75 374 Carbohydrate Esterase AT5G55590 53.583 2.76e-124 362