Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1981 ATGAGCTGCTTTTCGTTCTGTACGTCGAAGGAAAGACTCAATCGGAAGGCGTTACAGAAAAGCATTAAGGAGTATCATGATACAAGAACTCTAGCCTCATTTGCCAACATTTCTTTTAAAAGTGATGCCAACAAGAGAAGGTACATAACGGAAGAGATCAAAAGGATTGGAAAAGGAAATATCACTGCTAAGGTTTTTAGCTATCGAGAGCTATGTGTTGCAACGCAAAACTTTCACCCGGACAGGTTGATTGGTGAAGGAGGCTTTGGCAGGGTTTACAAAGGATACCTTGAAAGCACTAAACAATTTGTAGCAGTGAAGCAACTTGACAGGAATGGGTTTCAAGGAAATAGAGAATTTCTTGTAGAGGTTTTGATCTTAAGTCTCTTGCACCACCCTAACCTTGTCAATCTGGTAGGGTATTGCGCTGATGGTCATCAGAGGATTCTGGTGTACGAATACATGGTCAATGGTTCTTTAGAAGATCACCTTCTTGAATTAACTCCAGAAAGAAAGCCTTTGGACTGGAATACCAGAATGAAAATTGCTGAAGGAGCAGCAAAAGGACTGGAATACTTGCATGAAGTAGCGAACCCACCAGTGATATACCGAGATTTCAAGGCATCAAACATTCTATTGGATGAAGACTTCAATCCAAAGCTCTCCGATTTCGGATTGGCAAAGCTTGGTCCAACTGGGGATCAATCCCACGTGTCTACCAGGGTAATGGGAACTTATGGGTACTGTGCTCCCGAGTATGCACTCACAGGTCAGTTGAGCACAAAGTCTGACGTGTACAGCTTTGGAGTGGTGTTCCTGGAGATGATCTCTGGAAGAAGAGTGATTGATCCTTCTAGACCAACTGAAGAGCAAAATTTAATCCTTTGGGTAGAACCACTATTGAAAGACAGAAGGAAATTCACATTAATGACAGATCCATTGCTAGAAGGGGAATTCCCCATGAAAGGTCTATACCAAGCTCTAGCAGTTGCAGCAATGTGTCTCCAAGAGGAAGCTGCTACTCGGCCTTTGATTAGCGACGTAGTCACAGCTATGGAATTTTTGGCTACGAAGAATTTGCAAGCCGATGATGAAGACGACAAAGAACGTGTTTTTGACTCTTCCTCTCCCCCTGAGGACGACGGAGAATGCCGTATTAATGGAGGCTACGAATCTGACACAGCAGTTTGTGATCATAAAAGAGAACTTTAA 1212 0.4299 MSCFSFCTSKERLNRKALQKSIKEYHDTRTLASFANISFKSDANKRRYITEEIKRIGKGNITAKVFSYRELCVATQNFHPDRLIGEGGFGRVYKGYLESTKQFVAVKQLDRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCADGHQRILVYEYMVNGSLEDHLLELTPERKPLDWNTRMKIAEGAAKGLEYLHEVANPPVIYRDFKASNILLDEDFNPKLSDFGLAKLGPTGDQSHVSTRVMGTYGYCAPEYALTGQLSTKSDVYSFGVVFLEMISGRRVIDPSRPTEEQNLILWVEPLLKDRRKFTLMTDPLLEGEFPMKGLYQALAVAAMCLQEEAATRPLISDVVTAMEFLATKNLQADDEDDKERVFDSSSPPEDDGECRINGGYESDTAVCDHKREL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1981 403 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1981 403 FunFam Serine/threonine-protein kinase PBS1 155 370 - -
Bisa05g1981 403 SUPERFAMILY Protein kinase-like (PK-like) 64 358 IPR011009 -
Bisa05g1981 403 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Bisa05g1981 403 Gene3D Phosphorylase Kinase; domain 1 62 154 - -
Bisa05g1981 403 CDD STKc_IRAK 84 353 - -
Bisa05g1981 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Bisa05g1981 403 MobiDBLite consensus disorder prediction 365 389 - -
Bisa05g1981 403 PANTHER OS07G0668900 PROTEIN 21 363 - -
Bisa05g1981 403 Gene3D Transferase(Phosphotransferase) domain 1 155 378 - -
Bisa05g1981 403 MobiDBLite consensus disorder prediction 365 387 - -
Bisa05g1981 403 Pfam Protein kinase domain 79 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1981 403 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1981 Bisa-ChrBisa05 41555460 41560292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1981 60 357 Glycoside Hydrolase AT3G07070 72.148 1.11e-161 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bisa05g1981 Pkinase 8.3e-47 CL0016