Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1972 ATGGCTTTTGTGGTTTCCCCTTCGTTATGCACAAAATCCATGGCCGTTCAATGTTTATCATCTGCTCAGAATGAGCGTTTCATTTTGGGTAGTCTAACTTGGCCGCGTAAACCTCTATCCTTCTCCGTCCTCTTATCCTCTCGCGGTCGAAATTCCAGTTCTGCAATTGCCTCCGCATCTTCATCTCGCAAAAAGAAAAAGAAGCAACATTTGTCTCATAATCATGTTAAGGAGGGGGATGTGGAGGAGGATGCTTTCGAGCTTCTCTTCAAGCAACTGGAAGAAGATCTCAAAAATGATGATATGTTCATGGATAATAGCGATGATGAGATAACTGAGGAAGACCTAGCGATGTTCGAACGTGAATTAGAGGAGGTGCTGGGAGAAAATGATGCAGAAATGTGCTCAATCTTCAATGATACAGAAACTGATAGTAATATTAATAATAAAGAAGACAAAAAAGAAAGTGATGATGATGGAGATGGAAGGTTAGTGAACCTTGGAAATTGGCAGCTAAGGAAATTAGCAAAAGCACTAAAAGCTGGTCGTTGCAAAACAAGTATCAAAAGTCTTGCTGCTGAGCTTTGTCTTGAAAGGGCTGTTGTTCTTGAGTTGCTTCGTGAACCTCCTCCATATCTCTTAATGATGAGTCTTTCATTACCTGATGAGCCCGCAGCAACAGTTGTGGAGCCTGAAACCAAACCCAGGGAGACTGTTCATGAAGAAATAAGCGTGGATCATGCAGAGCCTAGATCGAAGACTAAAGTACCTGTTTATGTAATGCAACGTAGATGGTCTGCTCAAAAGAGATTGAAGAGGGTACACGTTGACACTCTGGAAAGAGTTTATAAGAGAACAAACCAGCCCACTAATGCAATGATCAGTAGCATCGTGCATGTGACGAACCTTCGTCGTAGAAGAGTTGTTAAATGGTTTGAAGACAAACGAGTTGAGGATGGAGTTCCAGATGATCGTGTTCCGTACCAGCGTGTTGTTCCTGAAGCTGTTTGA 1011 0.4233 MAFVVSPSLCTKSMAVQCLSSAQNERFILGSLTWPRKPLSFSVLLSSRGRNSSSAIASASSSRKKKKKQHLSHNHVKEGDVEEDAFELLFKQLEEDLKNDDMFMDNSDDEITEEDLAMFERELEEVLGENDAEMCSIFNDTETDSNINNKEDKKESDDDGDGRLVNLGNWQLRKLAKALKAGRCKTSIKSLAAELCLERAVVLELLREPPPYLLMMSLSLPDEPAATVVEPETKPRETVHEEISVDHAEPRSKTKVPVYVMQRRWSAQKRLKRVHVDTLERVYKRTNQPTNAMISSIVHVTNLRRRRVVKWFEDKRVEDGVPDDRVPYQRVVPEAV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1972 336 MobiDBLite consensus disorder prediction 141 163 - -
Bisa05g1972 336 ProSiteProfiles 'Homeobox' domain profile. 262 322 IPR001356 GO:0003677
Bisa05g1972 336 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 53 329 - -
Bisa05g1972 336 CDD homeodomain 265 316 IPR001356 GO:0003677
Bisa05g1972 336 MobiDBLite consensus disorder prediction 145 162 - -
Bisa05g1972 336 Gene3D - 264 319 - -
Bisa05g1972 336 Pfam Homeodomain 272 317 IPR001356 GO:0003677
Bisa05g1972 336 SMART HOX_1 269 326 IPR001356 GO:0003677
Bisa05g1972 336 MobiDBLite consensus disorder prediction 55 77 - -
Bisa05g1972 336 SUPERFAMILY Homeodomain-like 265 320 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1972 Bisa-ChrBisa05 41264381 41268168 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bisa05g1972 Homeodomain 3.6e-05 CL0123