Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1967 ATGGAAAAAGTAAAACCCTGGTCTTTCTACCACATTATGGGCTCTTTATGCTTCTCTGTACTCCTCTTGTCTGAAATCTGTCTGGCTGGAATTCAAAGAGTGGGGGAGATCCCTACAGGGTATGAAGGCTCACAAATGAACTGGATTGACAAAGACGGTATGTTTCTGGTATCAAAAAATGGAGACTTCAAGTTTGGCTTCATGACCACTCAAAACGACACCACATTGTTTCTCCTTGTAATCCTCCACGGCGACACTCCCACTGTCGTTTGGACGGCGAACAGAGGACACCCTGTGAGTAATTCCGATCGCTTTGTGTTTAATAAAGCAGGTAACGCGTTTTTACAGAAAGGAGGCTCTGTGGTTTGGTCCACAGATACAGAAGACAAAGGGGTTTCTTCAATGGAATTGCAGGACACAGGAAACTTGGTTTTGCTTAGAAATGATAGCAGTATAGTTTGGCAAAGTTTTGACCATCCAACAGATACGTTATTGCCAATGCAGGAATTCAAAGAAGGAATGAAACTCATCAGTGAAGAGAGTCGAAATAACTTGACCTATGTCCTTGAGATCAAATCTGGGGATGTAGTTCTCTCTGCTGGTTTTCAAACCCCACAGCCTTACTGGACTATCAAGAAAGATAGCCGCAAAACCATCAACAAAGACGGTGATTCTGTCGCTTTGACTTCGATAACTGCAAATTCCTGGAGATTCTATGATAAGAACAAGTCCTTGTTATGGCAGTTCATTTTTGCTCAAGATTCACCAGGCACAAATTCCTCGTGGCTTGCTGTTCTTGGAAGTAATGGTCTCATCACTTTCCCTAATCTTAATTCAAATGGTGCTTCTGCCTCACCAACTACAATTCCACAAGACTCTTGCAGTACACCAGAGCCTTGTGATCCTTACTACATATGCACAGGTGATAACAACTGTCGTTGCCCTTCTGTTCTTAGCTCTCATCCCAATTGCAAGCCAGGGTTTGCCTTTGCCTCTCCTTGTGATGATGACTCAAAGGTGTCATTAGAGCTCGTGAAAGCCGATGATGGACTCGATTACTTCGCGCTCGGATTCCTCTCGCCATCTTCCAAGACTGACTTGAATGGCTGCAAGGCTTCCTGCCAAGCAAACTGCTCTTGTCTTGCCATGTTCTTTCACAGCAATTCTGGGAACTGTTTTCATTTGGAAAGTATAGGAAGCTTCAAGAATTCTGGTACAAGTTCTGGTTTTGTTTCTTACATTAAGGTTTCAAGTAATGGAGACACTGGAACAGGAGGTGGTGGAAGCAGTAATAAACATACTGTGGTTGTTGTGGTTATTGTGATTATAACACTGCTTGTCATTTTCAGTTTGATCTACGTGGGATTTAGATGCTACAAGAGAAAGCAGAAATTGCCTGAGTCTCCAAGAGGGAGTTCAGAAGAGGACAATTTCCTGGAAAATTTAACTAGAATGCCAATACGTTTCACCTACAAAGACATGGTAACTGCAACTAATAACTTCTCAGAGAAGCTTGGACATGGAGGTTTTGGCTCAGTTTATAAGGGAACTCTACCAGATGGGACTCTTCTAGCTGTGAAGAAGCTGGAAAGCATAGGCCAAGGGAAGAAAGAGTTCAGAGCTGAAGTCAGCATCATTGGCAGCATTCATCATCTCCATTTGGTCAGACTCAAAGGGTTCTGTGCAGAAGGAACACATCGCCTTCTAGCTTATGAGTACATGGCAAATGGCTCACTCGACAAATGGATATTCAAGAAGAACAACGGAGAATTTATACTAGATTGGGACACCAGGTTTAACATAGCTTTAGGGACAGCAAAAGGGTTAGCATATTTGCATGACGATTGTGATTCAAAGATTGTTCACTGTGACATCAAACCAGAAAACGTCCTTCTTGATGATAACTTCCTAGCCAAAGTCTCAGATTTCGGTTTGGCCAAGCTCATGACTCGCGAGCAAAGCCATGTCTTCACAACACTAAGAGGAACCAGGGGATATCTCGCACCAGAGTGGATCACAAATTATGCCATATCAGAGAAAAGCGACGTGTACAGCTACGGGATGGTTTTACTTGAGATCATTGGTGGGAGAAAAAACTATGATCCTACTCGTAGTTCAGAGAAATCCCACTTTCCAACTTTTGCCTTCAAGATGATGCAAGAAGGGAAGTTGAAGGAGATTCTTGATTCCAAGTTGGGAATAGATGAGAATGACGAAAGGTTTCATGTTGCTGTCAAAGTTGCATTGTGGTGCATACAGGAAGACATGTCTCTGAGGCCATCCATGACCAAAGTTGTTCAAATGCTTGAGGGTCTCTCTACTGTTTCTAAGCCACCAGCAAGTTCTCCACTTGGTTCTCGTCTTTACTCAACTTTCTTCAAATCTGCAAGCGAAGCTGGTACATCTTCAGGACCATCAGACACTAATAGTGATGCTTATCTTTCTGCAGTTCAGCTCTCTGGACCAAGATAA 2472 0.43 MEKVKPWSFYHIMGSLCFSVLLLSEICLAGIQRVGEIPTGYEGSQMNWIDKDGMFLVSKNGDFKFGFMTTQNDTTLFLLVILHGDTPTVVWTANRGHPVSNSDRFVFNKAGNAFLQKGGSVVWSTDTEDKGVSSMELQDTGNLVLLRNDSSIVWQSFDHPTDTLLPMQEFKEGMKLISEESRNNLTYVLEIKSGDVVLSAGFQTPQPYWTIKKDSRKTINKDGDSVALTSITANSWRFYDKNKSLLWQFIFAQDSPGTNSSWLAVLGSNGLITFPNLNSNGASASPTTIPQDSCSTPEPCDPYYICTGDNNCRCPSVLSSHPNCKPGFAFASPCDDDSKVSLELVKADDGLDYFALGFLSPSSKTDLNGCKASCQANCSCLAMFFHSNSGNCFHLESIGSFKNSGTSSGFVSYIKVSSNGDTGTGGGGSSNKHTVVVVVIVIITLLVIFSLIYVGFRCYKRKQKLPESPRGSSEEDNFLENLTRMPIRFTYKDMVTATNNFSEKLGHGGFGSVYKGTLPDGTLLAVKKLESIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCAEGTHRLLAYEYMANGSLDKWIFKKNNGEFILDWDTRFNIALGTAKGLAYLHDDCDSKIVHCDIKPENVLLDDNFLAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPTRSSEKSHFPTFAFKMMQEGKLKEILDSKLGIDENDERFHVAVKVALWCIQEDMSLRPSMTKVVQMLEGLSTVSKPPASSPLGSRLYSTFFKSASEAGTSSGPSDTNSDAYLSAVQLSGPR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1967 823 Pfam Protein kinase domain 502 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1967 823 SUPERFAMILY Protein kinase-like (PK-like) 480 770 IPR011009 -
Bisa05g1967 823 Gene3D Phosphorylase Kinase; domain 1 466 573 - -
Bisa05g1967 823 PIRSF SRK 10 820 IPR024171 GO:0004674
Bisa05g1967 823 FunFam S-receptor-like kinase 5 574 778 - -
Bisa05g1967 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Bisa05g1967 823 ProSiteProfiles Bulb-type lectin domain profile. 41 158 IPR001480 -
Bisa05g1967 823 FunFam Serine/threonine-protein kinase 43 158 - -
Bisa05g1967 823 ProSiteProfiles Protein kinase domain profile. 499 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1967 823 FunFam serine/threonine-protein kinase PBS1-like 468 573 - -
Bisa05g1967 823 CDD B_lectin 49 160 IPR001480 -
Bisa05g1967 823 Pfam D-mannose binding lectin 88 171 IPR001480 -
Bisa05g1967 823 SMART serkin_6 499 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1967 823 CDD STKc_IRAK 505 772 - -
Bisa05g1967 823 Gene3D Transferase(Phosphotransferase) domain 1 574 780 - -
Bisa05g1967 823 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 46 780 - -
Bisa05g1967 823 ProSitePatterns Protein kinases ATP-binding region signature. 505 528 IPR017441 GO:0005524
Bisa05g1967 823 Gene3D - 49 159 IPR036426 -
Bisa05g1967 823 SMART blect_4 47 160 IPR001480 -
Bisa05g1967 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 178 IPR036426 -
Bisa05g1967 823 MobiDBLite consensus disorder prediction 797 823 - -
Bisa05g1967 823 CDD PAN_AP_plant 362 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1967 Bisa-ChrBisa05 41050545 41053016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1967 438 781 Receptor kinase-like Gene Family AT5G20050 44.809 8.53e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa05g1967 Pkinase 3.2e-50 CL0016