Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1966 ATGGATTTGGCAAAGAAAATATCAGTAAGGCGCTCACAATTCACAACGTTGGAAAGGGCAATTCATTCTCTACCAGCCGTTGGTGATATGACTTCGATTCTCTCCATCTCTAACCATTCTCTGCTTCGGTCTACTGTTTCCTGTTCCTTCTCCGAAATCAATATTCCCGCCAAATTACAATGGTCGTCTTCCTCGACAGCCAAATTTTGCTCAGACCACGCCAAAGAGTTCGTTTCAGGTCAAATTGGCGTATCAACTTCTACTAGCAGAAGGAGTGGGCTTATATTTATAGCCACACTACCATGTCTTCTTCCCTTAACGCAAATCATGGACAGTCATAGAGCAAATGCGATCGAGCCAGATACGAAGAAATATCTGCTTATAAGAGAAGAGGTCAGCAAGGTATTATCAAAAGGAAAGGCAGCAGGAGTTCTGCGTTTGGTTTTCCATGACGCTGGGACCTTTGAAATGGATAACAATTCAGGTGGCATGAATGGTTCTATAGTCTATGAACTTGAAAGACCTGAAAATGCTGGACTAAAAAAATCTATAAAGATTCTGCAGAAAGCAAAGACTCAAATAGATGCTACTGAACCAGTATCCTGGGCGGACATGGTTTCTGTGGCTGGAGCTGAAGCAGTTGCAGTATGTGGAGGACCAAAGATCCAACTTTCGCTTGGCAGGCTAGATTCTTTGGAGCCTGATCCTGAAGGGAAACTTCCTGAGGAATCTTTAAATGCTTCCGGTTTGAAGAAATGTTTCCAGAAAAAAGGCTTTTCAACACAAGAACTTGTAGCCTTGTCTGGAGCCCACACACTTGGAAGTAAAGGTTTTGGAAACCCAATTTCTTTTGACAATTCATATTACAAGGTTCTTCTGGAGAAGCCATGGATGTCTTCAGGTGGTATGTCAAGTATGATTGGCCTTCCTTCAGATCACGCACTTGTGGAGGATGATGAATGCTTAAGATGGATTAAAAAATATGCAGACAATGAGAATATGTTCTTTGAAGATTTCAAGAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAAAGCCTAA 1068 0.4213 MDLAKKISVRRSQFTTLERAIHSLPAVGDMTSILSISNHSLLRSTVSCSFSEINIPAKLQWSSSSTAKFCSDHAKEFVSGQIGVSTSTSRRSGLIFIATLPCLLPLTQIMDSHRANAIEPDTKKYLLIREEVSKVLSKGKAAGVLRLVFHDAGTFEMDNNSGGMNGSIVYELERPENAGLKKSIKILQKAKTQIDATEPVSWADMVSVAGAEAVAVCGGPKIQLSLGRLDSLEPDPEGKLPEESLNASGLKKCFQKKGFSTQELVALSGAHTLGSKGFGNPISFDNSYYKVLLEKPWMSSGGMSSMIGLPSDHALVEDDECLRWIKKYADNENMFFEDFKNAYVKLVNSGVRWKA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1966 355 PRINTS Plant ascorbate peroxidase signature 199 217 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 PRINTS Plant ascorbate peroxidase signature 239 256 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 PRINTS Plant ascorbate peroxidase signature 327 351 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 PRINTS Plant ascorbate peroxidase signature 218 230 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 PRINTS Plant ascorbate peroxidase signature 159 169 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 PRINTS Plant ascorbate peroxidase signature 257 278 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 PRINTS Plant ascorbate peroxidase signature 141 156 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 121 354 IPR044831 GO:0004601|GO:0034599
Bisa05g1966 355 FunFam Adenylate/guanylate cyclase 241 343 - -
Bisa05g1966 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 263 273 IPR019793 -
Bisa05g1966 355 Coils Coil 354 355 - -
Bisa05g1966 355 SUPERFAMILY Heme-dependent peroxidases 126 353 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 Pfam Peroxidase 130 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 ProSiteProfiles Plant heme peroxidase family profile. 141 355 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 ProSitePatterns Peroxidases active site signature. 141 152 IPR019794 GO:0004601
Bisa05g1966 355 Gene3D Peroxidase, domain 2 241 343 - -
Bisa05g1966 355 Gene3D - 129 350 - -
Bisa05g1966 355 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 PRINTS Haem peroxidase superfamily signature 200 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 PRINTS Haem peroxidase superfamily signature 141 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 PRINTS Haem peroxidase superfamily signature 218 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bisa05g1966 355 FunFam L-ascorbate peroxidase 131 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1966 Bisa-ChrBisa05 41043309 41046789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1966 141 346 Peroxidase AT4G16270 29.924 1.73e-21 92.4