Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa05g1961 | ATGGTACAAGCAAAGAAGTTCAGAGGAGTGAGGCAGCGCCAGTGGGGCTCCTGGGTGTCAGAGATTCGCCATCCATTACTGAAGAGAAGGGTATGGCTGGGGACTTTCGAGACAGCAGAGGCAGCTGCTCGGGCATATGACCAAGCAGCCATTTTGATGAGCGGTCAAAATGCGAAGACCAATTTCCCTAATCAGAATCAGATCAAAGACGTCGCTGCTTCTGACGACACCGCCAAAAACGTCTTTGCTTGTGACGACAGTGCCGCTTCGGCTCTTTCCTCTCTGCTGAGGGCGAAGCTCAGAAAGTGTTGCAGAGGTCCATCTCCGTCGCTCACATGTCTGAGGCTTGACGCCGATAATTCCCACATTGGGGTGTGGCAGAAAAAAGCAGGAACAAGTTCTGAGTCCAGTTGGGTCGTGAGGGTGGAGCTGGGGAAGAAACAGGGGAAGGGTAAGGCTACTGCGTCAGACGTCAATGGTGGAGAAGCAGGAAAAGGGGCAGAGGAAGAGGATAGGGTGGTGAAGCAGATGATTGAAGAGCTGCTTAATTGGAACCATACCTGCTCTTCAACTGCTTCTCAAGAATAA | 588 | 0.5187 | MVQAKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAAILMSGQNAKTNFPNQNQIKDVAASDDTAKNVFACDDSAASALSSLLRAKLRKCCRGPSPSLTCLRLDADNSHIGVWQKKAGTSSESSWVVRVELGKKQGKGKATASDVNGGEAGKGAEEEDRVVKQMIEELLNWNHTCSSTASQE | 195 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa05g1961 | 195 | Gene3D | AP2/ERF domain | 5 | 65 | IPR036955 | GO:0003700|GO:0006355 | |
| Bisa05g1961 | 195 | CDD | AP2 | 5 | 65 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa05g1961 | 195 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 4 | 152 | - | - | |
| Bisa05g1961 | 195 | ProSiteProfiles | AP2/ERF domain profile. | 6 | 63 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa05g1961 | 195 | FunFam | Ethylene-responsive transcription factor 2 | 5 | 64 | - | - | |
| Bisa05g1961 | 195 | Pfam | AP2 domain | 6 | 54 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa05g1961 | 195 | PRINTS | Ethylene responsive element binding protein signature | 29 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa05g1961 | 195 | PRINTS | Ethylene responsive element binding protein signature | 7 | 18 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa05g1961 | 195 | SMART | rav1_2 | 6 | 69 | IPR001471 | GO:0003700|GO:0006355 | |
| Bisa05g1961 | 195 | MobiDBLite | consensus disorder prediction | 149 | 170 | - | - | |
| Bisa05g1961 | 195 | SUPERFAMILY | DNA-binding domain | 6 | 64 | IPR016177 | GO:0003677 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa05g1961 | Bisa-ChrBisa05 | 40889088 | 40889778 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa05g1961 | 1 | 185 | AP2-EREBP Transcription Factor Family | AT1G15360 | 58.291 | 6.52e-71 | 212 |
Transcription factors information