Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1953 ATGTATGTGCTTGTGTGGCTCTCTGCCATACTTGTTCAGAGTCAGGCATGCCGGAGCTCTGCGAGTAAGGTCATCAGTTTCTCGTTCGCATCGTTTAGCCCTGAGAGTTGCAGCAAAGGGGAGCTGGTGTGCATGGGGTCGGTGAGGTCAGGGGAGGGGCATCTGAATCTGACTGCAGAGCCCACTGCAGAGCCCACGAACCCGAGGTTGAGGAACCAAATAGGGAGGGTTCTGTACCCTGAGAGGGTGGGAGCATGGCCTGCCTTCATCACCACCACCTTCACTCTCAAGATCACGCCAATGCCTAACTCAACCACCTCTGGTGATGGCATCACCTTCGTTCTCGCACAAGATCTCAGCCCCTCGCCACAGGGTAGCTTCGGCGCATATCTTGGCTTGTTTAATAGCTCCACACAAGGTGGATCTTTACGACAAATGGGTGTGGAGTTAGACACATTCATGAACGAGTTTGACCCAGATGGAAACCACGTTGCTATAGACACGACCAGCATCACAAGTCCAGTAGCTGTGGCGAGTCTCAACAGCATTGGGGTTGACCTCAAAAGTGGCAGAGACATCGAGGTCAAAATAGACTACGATGGTTCTTCTGAAATGCTCTATGTCTCTGTGGGATATTCCAAAGCCCACTTAAAGAGCATCCTTAACCATCCAATTGCTCTCTCAAACATAGTACCAAGCACTGTTTATGTTGGATTCACAGCCTCCACTGGCAGCACTTTTCCCGAAAGCCATCAGATTTTGAATTGGGTATTTACATCAGTGCCATTGCCCATGCCTTCTCTGAAAGGTGGCACCAGGAGGACCATATTGATTGTTGTGATACCTGTGTTTCTGGTGGTGTTGGTGAGTTCAATTCCGTTCATTTGGGAAGCTGTGAAGAAAAGAGATCATGAGAGGGGTGAGAATAAGAAAGATGTAGAAAGCTTATCAAGGACAGCTGCAGATATTCCCAAGGAGTTCAGCTTCAAGCAATTGTCAAAGGCTACTAACAATTTCAGCAAGGAGAATCTTTTGGGAAGAGGTGGATTTGGAAGTGTTTATAAAGGCGTGCTATCAAATCCTCCAAAAACCATAGCAGTCAAGAAGATCTCAGCAACCTCTAAACAAGGAGAAAGAGAGTATTTTGCTGAAATATGCACTATAGGGCGGGTTAGGCACAAGAACATTGTACAGCTCCAAGGGTGGTGCCATGAAGGTGACCACCTTCTTCTAGTCTACGAATACATGGAAAACGGAAGCTTGGATCGGTTTATAGGCACGGACATTCTAAACTGGCGAACAAGGCACAAGATACTAACAGGTCTAGCATCAGCGTTGCTATACCTTCACGAAGAGTGTGGCAACCCTGTGGTTCACAGAGACGTTAAGCCAAACAACGTAATGCTTGACTCAAACTACAACGCCCAACTGGGAGACTTTGGGCTTGCAAGGCTACTCCAAAACGAAGAATCAGTGATCACAAACCTCGCTGGAACTCCGGGGTATTTGGCCCCTGAAGTAGGGTTCACAGGGAAGGCCACACCAGAGTCAGATGTGTACAGCTATGGGATGGTGGTGCTTGAAGTGGTGTGTGGAAGAAGGTCAAAGAGTGTTATGGAGGAGAACAGTTTGGTGGACTATGTGTGGAACATGCATGTGGGAGACACGTTGATTGAGTGTGTGGATAGACTTTTGAGAGACGAGTTTGATGAGGAAGAAGCTAGGAGGGCTTTGATAGTGGGGCTGGCTTGTTTGCATACAGATTCGGTGTTGAGGCCAAAGATGAGAAAAGTGATTCATATTTTGTTGAACCCTAATGAGCCTTTAATGGAATTGCCAAGAATAAGACCTACAGGGGTTTATGTGACACTGTCTCCATCTAAATCGACTACTAACTTCGGTTCTAGAAGTGCATATCAATATCCTTTGCTTCAATCACCCACAACATCATCAGATGAAATTTCAATTGAATTTGATCAACAGTGA 1986 0.4683 MYVLVWLSAILVQSQACRSSASKVISFSFASFSPESCSKGELVCMGSVRSGEGHLNLTAEPTAEPTNPRLRNQIGRVLYPERVGAWPAFITTTFTLKITPMPNSTTSGDGITFVLAQDLSPSPQGSFGAYLGLFNSSTQGGSLRQMGVELDTFMNEFDPDGNHVAIDTTSITSPVAVASLNSIGVDLKSGRDIEVKIDYDGSSEMLYVSVGYSKAHLKSILNHPIALSNIVPSTVYVGFTASTGSTFPESHQILNWVFTSVPLPMPSLKGGTRRTILIVVIPVFLVVLVSSIPFIWEAVKKRDHERGENKKDVESLSRTAADIPKEFSFKQLSKATNNFSKENLLGRGGFGSVYKGVLSNPPKTIAVKKISATSKQGEREYFAEICTIGRVRHKNIVQLQGWCHEGDHLLLVYEYMENGSLDRFIGTDILNWRTRHKILTGLASALLYLHEECGNPVVHRDVKPNNVMLDSNYNAQLGDFGLARLLQNEESVITNLAGTPGYLAPEVGFTGKATPESDVYSYGMVVLEVVCGRRSKSVMEENSLVDYVWNMHVGDTLIECVDRLLRDEFDEEEARRALIVGLACLHTDSVLRPKMRKVIHILLNPNEPLMELPRIRPTGVYVTLSPSKSTTNFGSRSAYQYPLLQSPTTSSDEISIEFDQQ 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1953 661 SMART serkin_6 339 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1953 661 Pfam Protein kinase domain 340 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1953 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Bisa05g1953 661 SUPERFAMILY Protein kinase-like (PK-like) 324 625 IPR011009 -
Bisa05g1953 661 FunFam serine/threonine-protein kinase PBS1-like 304 415 - -
Bisa05g1953 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 261 IPR013320 -
Bisa05g1953 661 ProSitePatterns Protein kinases ATP-binding region signature. 345 369 IPR017441 GO:0005524
Bisa05g1953 661 CDD lectin_legume_LecRK_Arcelin_ConA 25 260 IPR001220 GO:0030246
Bisa05g1953 661 FunFam probable L-type lectin-domain containing receptor kinase S.5 416 610 - -
Bisa05g1953 661 PANTHER - 59 604 - -
Bisa05g1953 661 CDD STKc_IRAK 345 602 - -
Bisa05g1953 661 Gene3D Transferase(Phosphotransferase) domain 1 416 609 - -
Bisa05g1953 661 Pfam Legume lectin domain 25 261 IPR001220 GO:0030246
Bisa05g1953 661 ProSiteProfiles Protein kinase domain profile. 339 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1953 661 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Bisa05g1953 661 Gene3D - 23 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1953 Bisa-ChrBisa05 40574540 40578708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1953 4 618 Receptor kinase-like Gene Family AT5G55830 37.181 3.85e-119 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bisa05g1953 Pkinase 9e-49 CL0016