Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1948 ATGCAGGAGACATGTCAGACAACGACAAGTTCCCTTGCTGCTAGTTCTCTGCCTTCGAGCAGCGAAAAGTCTTCAAGCTCTGCCCTACAGATTGAAGTGAAAGAAGGTCCTGAGAGTGATGAGGAGATCAGAAGGGTGCCGGAGATGGGCGGCGAATCCGCCGGAACGCCGGCCTCGCGGCCAGAGGGCGGCGGAGAAGGGGTTAAGGGGACAGGGGAGGGTCAGAGGAAGAGAGGGAGAAGCCCTGCTGACAAAGAAAGCAAGCGCCTCAAAAGGTTGCTGAGGAACAGAGTTTCGGCTCAGCAAGCAAGGGAGAGAAGAAAGGCGTACTTGATTGATATGGAAGCAAGAGTTAAAGACTTGGAGAAGAAGAACTCGGAGATGGAAGAGAGGCTCTCCACTTTGCAGAATGAGAATCAGATGCTCAGACATATATTGAAGAACACAACAGCAAGCAGGAGAGGGGTCACTGGTAGTGTCACTGAAGGAACTTTATGA 498 0.5201 MQETCQTTTSSLAASSLPSSSEKSSSSALQIEVKEGPESDEEIRRVPEMGGESAGTPASRPEGGGEGVKGTGEGQRKRGRSPADKESKRLKRLLRNRVSAQQARERRKAYLIDMEARVKDLEKKNSEMEERLSTLQNENQMLRHILKNTTASRRGVTGSVTEGTL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1948 165 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Bisa05g1948 165 Gene3D Single helix bin 107 148 - -
Bisa05g1948 165 MobiDBLite consensus disorder prediction 1 32 - -
Bisa05g1948 165 Coils Coil 111 145 - -
Bisa05g1948 165 SMART brlzneu 84 148 IPR004827 GO:0003700|GO:0006355
Bisa05g1948 165 Pfam bZIP transcription factor 85 145 IPR004827 GO:0003700|GO:0006355
Bisa05g1948 165 MobiDBLite consensus disorder prediction 34 48 - -
Bisa05g1948 165 Coils Coil 83 103 - -
Bisa05g1948 165 CDD bZIP_HY5-like 89 140 - -
Bisa05g1948 165 MobiDBLite consensus disorder prediction 71 107 - -
Bisa05g1948 165 SUPERFAMILY Leucine zipper domain 88 146 IPR046347 GO:0003700|GO:0006355
Bisa05g1948 165 MobiDBLite consensus disorder prediction 1 107 - -
Bisa05g1948 165 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 86 149 IPR004827 GO:0003700|GO:0006355
Bisa05g1948 165 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 7 154 IPR044280 GO:0000981|GO:0045944
Bisa05g1948 165 FunFam Transcription factor HY5 107 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1948 Bisa-ChrBisa05 40511480 40513172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1948 28 145 bZIP Transcription Factor Family AT5G11260 70.732 7.26e-53 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bisa05g1948 bZIP_1 6.6e-12 CL0018