Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1945 ATGGCTTTTGTGGTTTCCCCTTCGTTATGCACAAAATCCATGGCCGTTCAATGTTTATCATCTGCTCAGAATGAGCGTTTCATTTTGGGTAGTCTAACTTGGCCGCGTAAACCTCTGTCCTTCTCCGTCCTCTTATCCTCTCGCGGTCGAAATTCCAGTTCTGCAATTGCCTCCGCATCTTCATCTCGCAAAAAGAAAAAGAAGCAAAATTTGTCTCATAATCATGTTAAGGTGGGGGATGAGGAGGAGGATGCTTTTGAGCTTCTCTTCAAGCAACTAGAAGAAGATCTCAAAAACGATGATATGTCCATGGATAATAGCAATGATGAGATAACTGAGGAAGACCTAGCCATGTTTGAACGTGAGTTAGAGGAGGCGCTGGGAGAAAATGATGCAGAAATGTGCTCAATCTTCAATGATACAGAAACTGATAGTAATATCAATAATAAAGAAGACAAAAAAGAAAGTGATGATGATGATGATGGAGATGGAAGGTCAGTGAACCTTAGAAATTGGCAGCTACGGAGATTAGCAAAAGCACTAAAAGCCGGTCGTCGCAAAACAAGTATCAAAAGTCTTGCTGCTGAGCTTTGTCTTGAAAGGGCTGTTGTTCTTGAGTTGCTTCGTGAACCTCCTCCATATCTCTTAATGATGAGTCTTTCATTACCTGATGAGCCCGCAGCAACAGTTGTGGAGCCTGAAACCAAACCCAGGGAGACTGTTCATGAAGAAATAAGCATGGATCACACAGAGCCTAGATCAAAGACTAAAGTACCTGTTCATGTAATGCAACGTAGATGGTCTGCTCAAAAGAGATTGAAGAGGGTACACGTTGACACTCTGGAAAGAGTTTATAAGAGAACAAAGCGACCCACTAATGCAATGATCAGTAGCATCGTGCATGTGACGAACCTTCCTCGCAGAAGAGTTGTTAAATGGTTTGAGGACAAACGAGCTGAGGATCGAGTTCCAAATGATCGTGTTCCGTACCAGCGCGTTGTTCCTGAAGCTGTTTGA 1017 0.4297 MAFVVSPSLCTKSMAVQCLSSAQNERFILGSLTWPRKPLSFSVLLSSRGRNSSSAIASASSSRKKKKKQNLSHNHVKVGDEEEDAFELLFKQLEEDLKNDDMSMDNSNDEITEEDLAMFERELEEALGENDAEMCSIFNDTETDSNINNKEDKKESDDDDDGDGRSVNLRNWQLRRLAKALKAGRRKTSIKSLAAELCLERAVVLELLREPPPYLLMMSLSLPDEPAATVVEPETKPRETVHEEISMDHTEPRSKTKVPVHVMQRRWSAQKRLKRVHVDTLERVYKRTKRPTNAMISSIVHVTNLPRRRVVKWFEDKRAEDRVPNDRVPYQRVVPEAV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1945 338 Pfam Homeodomain 274 322 IPR001356 GO:0003677
Bisa05g1945 338 SMART HOX_1 271 328 IPR001356 GO:0003677
Bisa05g1945 338 SUPERFAMILY Homeodomain-like 267 331 IPR009057 -
Bisa05g1945 338 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 55 331 - -
Bisa05g1945 338 MobiDBLite consensus disorder prediction 234 258 - -
Bisa05g1945 338 MobiDBLite consensus disorder prediction 55 77 - -
Bisa05g1945 338 MobiDBLite consensus disorder prediction 234 261 - -
Bisa05g1945 338 Gene3D - 266 328 - -
Bisa05g1945 338 MobiDBLite consensus disorder prediction 145 166 - -
Bisa05g1945 338 ProSiteProfiles 'Homeobox' domain profile. 264 324 IPR001356 GO:0003677
Bisa05g1945 338 MobiDBLite consensus disorder prediction 139 167 - -
Bisa05g1945 338 Coils Coil 90 110 - -
Bisa05g1945 338 CDD homeodomain 267 322 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1945 Bisa-ChrBisa05 40468673 40472049 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bisa05g1945 Homeodomain 1.9e-06 CL0123