Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1943 ATGGATTCTCCTGATGCTGCAAAAAACAACTTCATTTCTACTGCCACTGCCGATGTTACTGCTTCTTCAGAATCTCCTCCAGTTCAAGAGTCCCCTTTTTTCAGCTACGTAAATAATTTATCTCCAATAAAGTCTGTCAAGGCTTCTCGGGTGGCTCAAGATTTCCCGGGGCTCAATTCTCCACCTATTGTCTTCACGTCACCACGTATCAATCCTCATTGTGGATCACAGTTCTTGGAGAGGCCTCAATGCTCGCAATCGGCCACCGTAGGGATTCCCCAAAGTGACAATGGAGGCAATAGTCTTGCTGATAATCCTGATGGTTCCAAAAAGTCAAGTTCTTTACTGCTGGTGAAGTTTGTAAGTGGCAGTCAGAAGGATTTTGATATCAAGGATGATGCAAATACCCAACTCTGCAGTTCTTCACCGTGTGTAGAATCTGTAGATAAATATTTGGCTGATCCTGCAGATACTGATTGTATGTATTCAGGGATTTCAGTCGATCCAGATGTGAAACTATCTCCTAACACTGTTGAATCAGAGGAAACTATATTAAAATTTGATGACGAGAATGGTCCTAGTGACAAGGTAAAAGAACCTTTGCATTTGTCAGAGGAGTCTAAAAAACTTTATCAAGAAAAGCCAACATTTGATGATGAAACAAGGAAAGTAGGAGAGAAAAAAGATATTGAATGGCCTTCTCAAGAATGTGCAGAGTTAGAGTCCACTTTGTATGCTGACCTTGTTTTTGAGAAACAATGTTGTGATGATTCACTTGTCCAGGATGTTAAAGACAGTGAAGGTTGTAGTGGGATGGGGCCAACCTCTTATGTAAGTGAACAGAACATGTTGCAAGATTGTTCCAAGGCCAGTCAAAAGCACCGGGGCTTGCTTAGACGTTGTCTTCAGTTTGAGGAGGCTAATGCTTTTGGAAGTTTGAATAGTTCCCTGCTTCCTACCCATGTTCCAGAAGATTCAAAACCATCAGCTACCTCTTCAGATTCAAAAGATTTAAAAACTTCTCGTGTTGCATTACATGTGTCTTCAAGTGATAAGAGCATGGTTAAGCTGTCCAAACCTATCACATCCTTATTTTCTCCAAATTGTAGTGGAAACTTCCCTGTGGCAGGTTCCAAGCCATCAGGAATTGGGTTGCATTTAAATAGCATTGTAAATGCCATGCCCCATGGTCGTCCTGCACTTACAGGTATGAGATTAGCAGAGGGTTGTATGGATTCCCAAGGCATGAAGTCAGTGACGTCACTAAGTTGCCATAAAGTAGAGGACATAAAGAGGAGCTTAGATTCATCAAACATTGAGGGGACATCATCAGTTGATAACGAAGACAAGAGGCACGAAAGGAATGCTTCAATAGCTGCAGATTCTCATATCTCTGAGTCTCCCAGCTCTATAGAACTGCCAAATTTGTTGATTCGTGTTGAGCATCATGCAAGTGTCCATGATGGGAGAAAATTAAGGTCCATAAATGATGGAAATTTTGAGGATTCCAACCAAACAAGCCCCAGAAGGAAAAAGAAGAGAACTTCAAATACCACTGATGATGATGGTTGTAAAAGGTGCAACTGTAAGAAGAGTAAATGTTTAAAACTTTATTGTGATTGTTTTGCTGCCGGATTATATTGTGCTGAGCCTTGTGCTTGCCAAGGCTGCTTTAATAAACCAGAATACGAAGATTTGGTTCTTGAGACAAGGCAACAAATTGAATCCCGTAACCCACTTGCATTTGCCCCCAAGATTGTACCATCTGCTATTGATTTTCCACCAACTAATATGGAGGATGCCAATTTAACAACACCATCATCAGCAAGGCATAAAAGAGGTTGCAATTGCAAGAAGTCAATGTGTCTGAAAAAATATTGTGAATGCTATCAGGCTAATGTTGGATGCTCCGGTGGATGTCGATGTGAGGGATGCAAGAATGTCTATGGCAGGAAAGAAGATTACTTTGCTATGGAACATGGTTTGAGTGAAGAAAGGGTGAGAAACAGAGTTGAAGGAGGATCAGATAGCACGCTTCAGAATAAGTTGGAAATGGCGGCAAAGAAGGCAGATTTGTTAGATGGAGAGTTGTATGATCCGCAGCACCTCTCTCCTCTAACACCGTCTTTACAATGTTCAGATCAAGGAAAGCAAGCTGCACATTTCCGAGCTCCTTCTGGAAAATGCCCTCCAGCCCCTGAGATGTTAACAAATGCTTCTAATTATTGGCAACAGGATTGCAACAGCGTGGAAATAACGGATCAATCATCACCAAGATGTAGTTCAGTTGCTAACGTACGTGAGCTCACCCTTTCTAATTCTCAGTCAACGTCTAGTGCTTCATTCTCATCTAAAACAAGGGATCAGACACATGTTCGACATGTTTTATCTGGCGGTTCCCTTCGTTGGCGTAGTTCACCAATCACCCCAATGACTAAATTAGGCGAAACTAGACCTCAGATGTGTCTTGAATCGGGTAGCAGACTCTATGACATTTTAGAAGATGAAACTCCTGATATATTGAAGGAAGCATCAACTCCAATTAAGTCTGTGAAAGCAAGTTCCCCAAAACAGAAGCGAGTTTCTCCTCCTCAGAGTAATCTGCGTGAACTCGGTTCAGGCTCTTCAGGAGGCTTGAGAAGTGGCCGGAAATTTATATTGAAAGCTGTGCCTTCTTTCCCACCATTGACCCCTTGCATTGATTCCAAACGCAATGATCATGAGGATTCAGGTACTAGTCCCAGCAAGCAAGTGACGGATGATCCCAAAAGTCGAAGGGCGCTCCCAATGTGA 2793 0.4221 MDSPDAAKNNFISTATADVTASSESPPVQESPFFSYVNNLSPIKSVKASRVAQDFPGLNSPPIVFTSPRINPHCGSQFLERPQCSQSATVGIPQSDNGGNSLADNPDGSKKSSSLLLVKFVSGSQKDFDIKDDANTQLCSSSPCVESVDKYLADPADTDCMYSGISVDPDVKLSPNTVESEETILKFDDENGPSDKVKEPLHLSEESKKLYQEKPTFDDETRKVGEKKDIEWPSQECAELESTLYADLVFEKQCCDDSLVQDVKDSEGCSGMGPTSYVSEQNMLQDCSKASQKHRGLLRRCLQFEEANAFGSLNSSLLPTHVPEDSKPSATSSDSKDLKTSRVALHVSSSDKSMVKLSKPITSLFSPNCSGNFPVAGSKPSGIGLHLNSIVNAMPHGRPALTGMRLAEGCMDSQGMKSVTSLSCHKVEDIKRSLDSSNIEGTSSVDNEDKRHERNASIAADSHISESPSSIELPNLLIRVEHHASVHDGRKLRSINDGNFEDSNQTSPRRKKKRTSNTTDDDGCKRCNCKKSKCLKLYCDCFAAGLYCAEPCACQGCFNKPEYEDLVLETRQQIESRNPLAFAPKIVPSAIDFPPTNMEDANLTTPSSARHKRGCNCKKSMCLKKYCECYQANVGCSGGCRCEGCKNVYGRKEDYFAMEHGLSEERVRNRVEGGSDSTLQNKLEMAAKKADLLDGELYDPQHLSPLTPSLQCSDQGKQAAHFRAPSGKCPPAPEMLTNASNYWQQDCNSVEITDQSSPRCSSVANVRELTLSNSQSTSSASFSSKTRDQTHVRHVLSGGSLRWRSSPITPMTKLGETRPQMCLESGSRLYDILEDETPDILKEASTPIKSVKASSPKQKRVSPPQSNLRELGSGSSGGLRSGRKFILKAVPSFPPLTPCIDSKRNDHEDSGTSPSKQVTDDPKSRRALPM 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1943 930 MobiDBLite consensus disorder prediction 504 523 - -
Bisa05g1943 930 MobiDBLite consensus disorder prediction 845 930 - -
Bisa05g1943 930 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 21 903 IPR044522 GO:0003700
Bisa05g1943 930 SMART CXC_2 522 563 IPR033467 -
Bisa05g1943 930 SMART CXC_2 610 651 IPR033467 -
Bisa05g1943 930 MobiDBLite consensus disorder prediction 489 523 - -
Bisa05g1943 930 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 613 647 IPR005172 -
Bisa05g1943 930 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 525 560 IPR005172 -
Bisa05g1943 930 MobiDBLite consensus disorder prediction 772 814 - -
Bisa05g1943 930 MobiDBLite consensus disorder prediction 85 108 - -
Bisa05g1943 930 MobiDBLite consensus disorder prediction 315 340 - -
Bisa05g1943 930 MobiDBLite consensus disorder prediction 901 930 - -
Bisa05g1943 930 MobiDBLite consensus disorder prediction 433 452 - -
Bisa05g1943 930 MobiDBLite consensus disorder prediction 848 874 - -
Bisa05g1943 930 ProSiteProfiles CRC domain profile. 523 650 IPR005172 -
Bisa05g1943 930 MobiDBLite consensus disorder prediction 1 28 - -
Bisa05g1943 930 MobiDBLite consensus disorder prediction 772 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1943 Bisa-ChrBisa05 40278307 40283345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1943 564 898 CPP Transcription Factor Family AT3G22760 25.627 1.04e-08 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Bisa05g1943 TCR 5.4e-11 No_clan