Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1938 ATGCGCGCCCTTAGAATAATGACGAATATTTTTTTAAAGGTATTCTGTGGGAAGGGAGGCGAAAGAAAATTTGAGTTAGAGCAACCGTCCAGGGAGGGCAGCCATTACAGCCTCACCGGTACCCCCCTTCCTTCTCTTGGAGCCACCGCCGTCCGCAGCAACCGTAGATCCAAGCTCCGATCCTACGTTATCTCACCTTTCAGCCATCGTTACAGATCCTGGGAGACATTTCTGGCGATTTTAGTTTTCTACACTGCATGGGTTTGCCCATTTGAACTCGGATTCCTTGCGAAGCCAACTTGTGCTCTTTCTATAGCTGATAATGTTGTCAACGGATTTTATGCCATTGACATTGTTCTGACCTTCTTTGTTGCCTACCTGGACAAAATTTCTTATTTGCTTATCGACAACCCAAAATTGATTGCTCTGAAATATGCCAAAACCTGGTTGGCCTTTGATGTCATCTCTACCATCCCCTTTGAACTTGCTCATAGAATATTGCCCCCTCCTCTTCAGACATATGGGTTCTTTAATATGCTCCGACTTTGGCGTCTCCATAGAGTCAGTGCCATGTTTGCAAGATTAGAAAAGGACACAAATTATAGCTACTTCTTGGTACGCTGTTCAAAGCTTATATGTGTTACTCTATTTTCATTGCATTTTGCTGCCTGCTTTTACTATTTCCTTGCTGCACATCGTGACCCAAAAAGCACATGGCTTGGCCTAGTTGCTAGTGGTGATGACCTGGATCTGTGGGACCGCTATGTAACATCAATTTACTGGGCAATAGTTACTCTTTCTACAGTTGGTTATGGTGATTTGCATCCTGTAAATTCAAAGGAGATGGTGTTCGATATTTTCTACATGCTCTTCAATCTTGGACTTACCTCATATCTGATAGGGAACATGACCAATTTGGTTGTCCATAGCACAAGTAGAACTAGGAAATATAGAGACACCGTCCAAGCTGCCACAGATTTTGCACAACGGAATCAGTTGCCGGTCCGCCTGCAAGAACAGATGCTTGCTCATTTATCCATGAAGTACAGAACAGATGTAGAAGGACTGCAGCACCAAAAGATTATTGCTTCTCTTCCAAAAGCCATTCAGTCTAGCATCTCACATTACCTCTTCTATTCACTTGTTGACAAAGTCTACTTATTTCTGGGCGTGTCCAATAACCTACTTTTTCAGCTGGTCACAGAAATGAAAGCTGAGTATTTTCCTCCAAAGGAAGACGTTATTTTACAGAATGAAGCACCAGCAGACTTCTATATATTGGTTACTGGTGTAGCTGTTGTTGGTGAAGCAAAGATAGGAGATGTAGTTGGAGAGATAGGTGTGCTATGTTACAGGCCACAGCTCTTTACAGTTCGAACCAAACGATTAAGCCAGCTTCTTCGTTTGGACCGCTCAACATTTATAAATCTTGCTAAATCAAATGTTGGAGATGGGACAATAATAATGAACAATTTTCTTCAGCATTTGAAAGGATGTAGGGATCCGGCGATGGATGGAGTTTTGGCAGAAACTGAGGCCATGCTAGCTCGGGGCGGAATGGATATGCCTATAGGTCCATGCTTTGCTGCAAACAAAGATGACGATCTGTTGTTGCATCATTTGCTGAAGAGGAAATCTGATCCAAATGAAGCAGATAAGAATGGGAGGACAGCACTGCATATTGCGGCATCTAAAGGCAGTGAACATTGTGTTGTCCTGCTTATAGAATATGGAGCTGATCCCAACAGCAAAGATTTCGATGGAAGTGTCCCGCTATGGGAAGCAATGATGGGAGGGCATGAATCTGTGATAAAACTTTTAATAGACAATGGTGCAGCCATACCTGAAGACAAAGTGGGCCATTTTGCCTGCACTGCTGTTGAGCAAAACAACTTGGAATTGCTCAAAAAAATTGTACAATATGGTGGGAGTGTGACGCAGCCCAAAAGAAATGGGACCACAGCACTGCACACGGCGGTAAGTGAAGGAAACACTGAAATAGTAAAGTTCCTTCTGCAACAAGGAGCAGACATTAATAGGCCAGATATTCTTGGATGGACTCCTTGGGCTTTGGCAGATCATCAAGGACATGAAGAAATCAAAAAGATATTTCAGAACAGTCGAGATGGCAAAAGCTCCCCAGATATTCCAAATCCAAGGTCAATGAATTACGGCAAAAGACCCCCTGATATTCCAAAGTCAATGAGTTGTGTGCCACCCCTGGTGAGGTTTCAAAGTGAACCAACAATGTATACCGTTTCCCGAGGAAGCATGCGAGCACCTGGTCAAGACTTGACATGCTGGGAGAACCGTCCAGGGCAGAGGGTCAACAATTTCAACAATTCTTTATTTGGAATCATGTCGGTTGTTGCTAACCGCGGTCAAGCCGAAGCATCACAAAACAATCTTGGTGTTGCAGAGAATCTGAATGAATTCCCAGCCAGAGTAATTCTGAGTTGTCCAGAAATTGGGGAACATGCTAAAAAGCTTGTTTTTCTGCCCAAGTCCCTTCAAGAATTGATAAATATGGGAGGGAAAAAGTTTGACTTTCCTGCCACCAAAATTTTGACTGCAGAGGGAGCTGAAGTGGAGGATATAAAGCTTATAAGAGATGGTGATCATCTCATTCTTGCCCGTGATATTGCTCAACGCAGCCCAAGTGAAGGCAGAATAAAAATGCAAAGGGACAAAAGAGATGAAAAAAGGCCTTCTTTTCATGAAGCGGTGTCCTCATCACACTGCCTTACCATTTTGCCACCTTAA 2763 0.4332 MRALRIMTNIFLKVFCGKGGERKFELEQPSREGSHYSLTGTPLPSLGATAVRSNRRSKLRSYVISPFSHRYRSWETFLAILVFYTAWVCPFELGFLAKPTCALSIADNVVNGFYAIDIVLTFFVAYLDKISYLLIDNPKLIALKYAKTWLAFDVISTIPFELAHRILPPPLQTYGFFNMLRLWRLHRVSAMFARLEKDTNYSYFLVRCSKLICVTLFSLHFAACFYYFLAAHRDPKSTWLGLVASGDDLDLWDRYVTSIYWAIVTLSTVGYGDLHPVNSKEMVFDIFYMLFNLGLTSYLIGNMTNLVVHSTSRTRKYRDTVQAATDFAQRNQLPVRLQEQMLAHLSMKYRTDVEGLQHQKIIASLPKAIQSSISHYLFYSLVDKVYLFLGVSNNLLFQLVTEMKAEYFPPKEDVILQNEAPADFYILVTGVAVVGEAKIGDVVGEIGVLCYRPQLFTVRTKRLSQLLRLDRSTFINLAKSNVGDGTIIMNNFLQHLKGCRDPAMDGVLAETEAMLARGGMDMPIGPCFAANKDDDLLLHHLLKRKSDPNEADKNGRTALHIAASKGSEHCVVLLIEYGADPNSKDFDGSVPLWEAMMGGHESVIKLLIDNGAAIPEDKVGHFACTAVEQNNLELLKKIVQYGGSVTQPKRNGTTALHTAVSEGNTEIVKFLLQQGADINRPDILGWTPWALADHQGHEEIKKIFQNSRDGKSSPDIPNPRSMNYGKRPPDIPKSMSCVPPLVRFQSEPTMYTVSRGSMRAPGQDLTCWENRPGQRVNNFNNSLFGIMSVVANRGQAEASQNNLGVAENLNEFPARVILSCPEIGEHAKKLVFLPKSLQELINMGGKKFDFPATKILTAEGAEVEDIKLIRDGDHLILARDIAQRSPSEGRIKMQRDKRDEKRPSFHEAVSSSHCLTILPP 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1938 920 PRINTS EAG/ELK/ERG potassium channel family signature 118 127 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa05g1938 920 PRINTS EAG/ELK/ERG potassium channel family signature 107 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa05g1938 920 PRINTS EAG/ELK/ERG potassium channel family signature 255 272 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa05g1938 920 PRINTS EAG/ELK/ERG potassium channel family signature 299 308 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa05g1938 920 PRINTS EAG/ELK/ERG potassium channel family signature 281 292 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa05g1938 920 PRINTS EAG/ELK/ERG potassium channel family signature 84 91 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bisa05g1938 920 Pfam Ankyrin repeats (3 copies) 626 703 IPR002110 GO:0005515
Bisa05g1938 920 Pfam Ankyrin repeats (3 copies) 529 613 IPR002110 GO:0005515
Bisa05g1938 920 MobiDBLite consensus disorder prediction 886 907 - -
Bisa05g1938 920 FunFam Potassium channel KAT2 375 500 - -
Bisa05g1938 920 ProSiteProfiles Ankyrin repeat region circular profile. 587 614 - -
Bisa05g1938 920 Gene3D Jelly Rolls 353 498 IPR014710 -
Bisa05g1938 920 Pfam Ion transport protein 72 314 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa05g1938 920 CDD CAP_ED 387 477 IPR000595 -
Bisa05g1938 920 SUPERFAMILY Voltage-gated potassium channels 66 308 - -
Bisa05g1938 920 SUPERFAMILY cAMP-binding domain-like 312 496 IPR018490 -
Bisa05g1938 920 MobiDBLite consensus disorder prediction 886 911 - -
Bisa05g1938 920 SMART cnmp_10 387 493 IPR000595 -
Bisa05g1938 920 SMART ANK_2a 651 680 IPR002110 GO:0005515
Bisa05g1938 920 SMART ANK_2a 587 616 IPR002110 GO:0005515
Bisa05g1938 920 SMART ANK_2a 618 647 IPR002110 GO:0005515
Bisa05g1938 920 SMART ANK_2a 554 583 IPR002110 GO:0005515
Bisa05g1938 920 Gene3D - 525 706 IPR036770 -
Bisa05g1938 920 Gene3D - 73 309 - -
Bisa05g1938 920 ProSiteProfiles KHA domain profile. 815 895 IPR021789 -
Bisa05g1938 920 ProSiteProfiles cAMP/cGMP binding motif profile. 387 495 IPR000595 -
Bisa05g1938 920 FunFam Potassium channel KAT3 73 309 - -
Bisa05g1938 920 ProSiteProfiles Ankyrin repeat profile. 587 614 IPR002110 GO:0005515
Bisa05g1938 920 ProSiteProfiles Ankyrin repeat region circular profile. 651 682 - -
Bisa05g1938 920 PRINTS Ankyrin repeat signature 555 570 IPR002110 GO:0005515
Bisa05g1938 920 PRINTS Ankyrin repeat signature 667 681 IPR002110 GO:0005515
Bisa05g1938 920 ProSiteProfiles Ankyrin repeat profile. 651 683 IPR002110 GO:0005515
Bisa05g1938 920 MobiDBLite consensus disorder prediction 705 732 - -
Bisa05g1938 920 Pfam KHA, dimerisation domain of potassium ion channel 815 877 IPR021789 -
Bisa05g1938 920 PANTHER POTASSIUM CHANNEL AKT1 33 879 IPR045319 GO:0005249|GO:0006813
Bisa05g1938 920 SUPERFAMILY Ankyrin repeat 528 705 IPR036770 -
Bisa05g1938 920 ProSiteProfiles Ankyrin repeat region circular profile. 554 585 - -
Bisa05g1938 920 ProSiteProfiles Ankyrin repeat profile. 554 586 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1938 Bisa-ChrBisa05 40081533 40087327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1938 30 880 Ion Channels AT2G25600 59.494 0.0 1019