Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1933 ATGGATGGAATGGAACAGCTTAATAATAGTAAATTCAGGACCTCCAGTGAGAGTCGACCTCCGAACCCGCTTGCTGCTGAATATCGGCAATGCCTCAGCACCGACCGGATGGCGGGATCGGGCAAGAAGACCCTTGTTCGTCACCCTTCTCTTATGAAGACAAAGGTGTCTGAAGTATCTGCTGACTCGGGACAGGTTATTGAAGATTGCGACTCTGAGTTTCTACCAATGCTTCATTCTGGAGCATGTGCTGATATTGGGTTCCGGTCAAGCATGGAAGATGTGTATGTGTGCGTGGACAACTTGATGCTGGATTATGGGCTCAAGAATCATATAGATGGACCCAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGACTTTGCTTGCTGTCATTTGCCGAAATTCATTGTGGAGGATGAGAGTTTCCCAAGTGATATAGAAAGGGTGGTTGTGTCAGCATTTTTTCAAACAGACACTGCCTTTGCAGAAGCTTGCTCTCTCAATGCTGCCCTTTCCTCTGGCACCACTGCATTGGCTGCTCTTGTAGTTGGAAGGCTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGTCGCCGTGGAAGGGCAATTGAAATGTCAAGGGATCACAAACCAATATGTGTCAAAGAGAAGAAGCGCATTGAGGCATCTGGAGGCTATGTGTATGATGGATATCTCAATGGACAACTTAATGTTGCTCGTGCTCTAGGTGATTGGCACATGGAAGGAATGAAAGTCACAGAAGGTGGACCACTCAGTGCAGAGCCTGAAGTCATGATCACAAAACTGACTGAAGAGGATGAATTTCTCATTATGGGTTGTGATGGGATTTGGGATGTCTTTAGGAGCCAAAATGCAGTGGATTTTGCCAGGCGTAGGCTTCAGGAGCATAATGACCCTGCCAAGTGCAGTAAGGATCTGGTTGATGAGGCTTTGAAGCGGAAGAGTGGAGACAATTTAGCGGTGGTCGTGGTTTGCTTCCAGCAGCAGCCTCCACCTAACTTGGTGGCCCCGCGTACTCGAGTTCATAGGAGCTTCTCCGCCGAAGGTTTGAGGGAGTTGCAAAGTTTTCTGGATGGTTTGGGTAATTGA 1137 0.4811 MDGMEQLNNSKFRTSSESRPPNPLAAEYRQCLSTDRMAGSGKKTLVRHPSLMKTKVSEVSADSGQVIEDCDSEFLPMLHSGACADIGFRSSMEDVYVCVDNLMLDYGLKNHIDGPSAFYGVFDGHGGKHAADFACCHLPKFIVEDESFPSDIERVVVSAFFQTDTAFAEACSLNAALSSGTTALAALVVGRLLVVANAGDCRAVLCRRGRAIEMSRDHKPICVKEKKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKVTEGGPLSAEPEVMITKLTEEDEFLIMGCDGIWDVFRSQNAVDFARRRLQEHNDPAKCSKDLVDEALKRKSGDNLAVVVVCFQQQPPPNLVAPRTRVHRSFSAEGLRELQSFLDGLGN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1933 378 SUPERFAMILY PP2C-like 73 344 IPR036457 -
Bisa05g1933 378 SMART PP2C_4 68 340 IPR001932 -
Bisa05g1933 378 PANTHER PROTEIN PHOSPHATASE 2C 57 340 IPR015655 GO:0004722|GO:0006470
Bisa05g1933 378 MobiDBLite consensus disorder prediction 7 21 - -
Bisa05g1933 378 CDD PP2Cc 79 342 IPR001932 -
Bisa05g1933 378 Pfam Protein phosphatase 2C 81 334 IPR001932 -
Bisa05g1933 378 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Bisa05g1933 378 ProSiteProfiles PPM-type phosphatase domain profile. 79 342 IPR001932 -
Bisa05g1933 378 MobiDBLite consensus disorder prediction 1 23 - -
Bisa05g1933 378 FunFam Probable protein phosphatase 2C 22 63 345 - -
Bisa05g1933 378 Gene3D - 61 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1933 Bisa-ChrBisa05 39935775 39938373 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1933 14 378 PP2C-type Phosphatase Gene Family AT2G25620 68.254 0.0 528