Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1914 ATGGAGCGTCAGTTAGGTTTGGCTCTCTCAACTGAGAATCCCGTTGAGAGATTTGACCTAACCAACCATGGCTTAGAAAGTTCAGATCAGTTATGGAGGCCTAGTTGCTGTCTGGAAGGCAACAAGCATGTCAAAAACAAGCGTAGCTTTGAAGAGTCATTTGGACATTGTCCTTTGAAACCTCTGCCTTTACTGATAGGGAGTGGACAGCCAAATGAGGAAGATGACCGTAGTGGAAAGAAAAACAGAGAAACATACTCAACGAACAAGAATAACGAAGAAGAAAACTGTGTAGTGGGATGGCCACCCATTAAATCATGGAGGAAGAAGAAACTGCATCAGCAGCACCCAGGAGTCCAGATCAGGAACCGTAGGGTGCCAGCTGAGAATGGAAGCAGAGGATCAAACTCCTTATTTGTCAAGGATAAGATGGAAGGGGTAGCAATAGGAAGGAAGATCGATTTGAGGCTTTACAGCTCGTGTCAGACTCTTACAAATAAGTTAATTAGTATGTTTGGTAGATACCAAAAACTTGAGGAAGATGGGGCAAGTTATACACTCACTTATGAAGAAGAAAGAGGGGATCGGCTGTTTGCTGGACATGTTTCATGGCAATCCTTCATTGATTCCCTGAAGAGTTTGGAGATATTAAGGAATGGTGCCGGAGAATCTAGTTGA 678 0.4351 MERQLGLALSTENPVERFDLTNHGLESSDQLWRPSCCLEGNKHVKNKRSFEESFGHCPLKPLPLLIGSGQPNEEDDRSGKKNRETYSTNKNNEEENCVVGWPPIKSWRKKKLHQQHPGVQIRNRRVPAENGSRGSNSLFVKDKMEGVAIGRKIDLRLYSSCQTLTNKLISMFGRYQKLEEDGASYTLTYEEERGDRLFAGHVSWQSFIDSLKSLEILRNGAGESS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1914 225 Pfam AUX/IAA family 41 219 IPR033389 -
Bisa05g1914 225 SUPERFAMILY CAD & PB1 domains 132 216 - -
Bisa05g1914 225 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 219 IPR003311 GO:0005634|GO:0006355
Bisa05g1914 225 MobiDBLite consensus disorder prediction 64 91 - -
Bisa05g1914 225 Gene3D - 132 224 - -
Bisa05g1914 225 ProSiteProfiles PB1 domain profile. 137 224 IPR000270 GO:0005515
Bisa05g1914 225 MobiDBLite consensus disorder prediction 73 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1914 Bisa-ChrBisa05 38787805 38789301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1914 127 216 B3 DNA Binding Superfamily AT2G46530 30.000 3.00e-06 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa05g1914 AUX_IAA 1.3e-29 CL0072