Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1902 ATGTCAATGGGATCTCAGGCATGGGAGGAAATCTTAGAAGTTTTTCCACAAACACAAGACTCAAGCAGTAGCAATTTGGAAATTTGCAGAGACATTAAATCCAATTATAAGAAGGCAGGTGAAAGACAGTACAGAGGAGTAAGAAGAAGGCTGTGGGGAAAAAATGCACCAGAAATTAGAGACTCGGCAAGGAAAGGTGCAAGGCTATGGCTTGGGATATTTAAGACAGCTGAGGAAGCAGCTTTGGCTTATGAAAAGGCAGCCTTGAGAATTAGAGGTCCTAAGGCATACCATAATTTCCCATATCAGTCTGTTGAAAATGCTTTACGATTTGACTACAAACAAAGTACTACCTGTGCTTCTTCAAATTGTGAAGAAAATTGTTGCGTTTCCAGGAAAAGAAGATTGAAGGAAGGGGAAGAAATTGGTAGCGTGATGAATGATCTAGATGTTCTTGTCTTTCATCTCTTCCATCAAGATTTGGAAGATCCTCTCATGATTTGGAAGATTCCAGTGCATTTTTCGTTATTCCGTGCCGCCTTTAGGACCGGAGAAAAGGATGGAAAACAAAACAAAGTATATTGA 585 0.4 MSMGSQAWEEILEVFPQTQDSSSSNLEICRDIKSNYKKAGERQYRGVRRRLWGKNAPEIRDSARKGARLWLGIFKTAEEAALAYEKAALRIRGPKAYHNFPYQSVENALRFDYKQSTTCASSNCEENCCVSRKRRLKEGEEIGSVMNDLDVLVFHLFHQDLEDPLMIWKIPVHFSLFRAAFRTGEKDGKQNKVY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1902 194 Gene3D AP2/ERF domain 42 103 IPR036955 GO:0003700|GO:0006355
Bisa05g1902 194 PANTHER DNA-BINDING DOMAIN 33 120 IPR044808 GO:0003700|GO:0009873
Bisa05g1902 194 CDD AP2 43 103 IPR001471 GO:0003700|GO:0006355
Bisa05g1902 194 ProSiteProfiles AP2/ERF domain profile. 43 101 IPR001471 GO:0003700|GO:0006355
Bisa05g1902 194 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700|GO:0006355
Bisa05g1902 194 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Bisa05g1902 194 Pfam AP2 domain 43 93 IPR001471 GO:0003700|GO:0006355
Bisa05g1902 194 SMART rav1_2 43 107 IPR001471 GO:0003700|GO:0006355
Bisa05g1902 194 SUPERFAMILY DNA-binding domain 43 102 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1902 Bisa-ChrBisa05 37849902 37850486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1902 1 141 AP2-EREBP Transcription Factor Family AT4G18450 44.371 5.02e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa05g1902 AP2 1.9e-08 CL0081