Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1894 ATGGCGGCGAAAGGCATAAGCTGGGTGAGATACGTCACTGTGAATCGAGTTCTTTGGTTATGTCTGTGTCTTAATGCCTCTCTGTTTCTGAGTTCTCTGATATCTCGTCAGGATTCAGAAACTCTAGCAGGATTGTTCTTCAATTTCAAGTATTTTGAAGAGCAGGTGCTCAATGGAAACTGGGATGAAGCTGAAAGGTATCTTCTGGGATTTACCAAATTTGATGACAACAAGTTTTCGATGAAGGTGATTTTTGAAGTTCGGAAGCAGAAGTATCTTGAGGCGCTGGATAAGCTTGATCGCGCCAAGGCCGTGGATATCCTAGTGAACGATCTAAGGGTGTTTTCCTCATTTGATGAAGATTTGTTCAAGGAAATAACCCAGCTTCTTACATTGGACAATTTTAGGGAAAACAGTTGCCTATCTCATTACAGAGACACAAAGACTGCAAGAGAATTAATGGTGGCTGAAGTCAAAAGGCTTATTGAATTGAATCCCCTTTTTCGAGATAAATTGGAATTCCCTCACATAAGAACTTCAAGATTGAGAACTCTTATTAATCAAAGCTTAAATTGGCAGCATTCACTTTGTGTAAAACCTGTACAAAATCCCGACATTGCAACCCTCTTCCACGATCATACTTGTAGAAGTTCGAGCGATCCATTGGCACAAATGTCTGCAAGCAATCAGTTTATAGCTCCCACCTCAAGAGTTGAGGGTTTTCATCCAATAGGAGCAATGGCAAAGGGAGTTGGGGGTCCCGATGACATGTGCATGATGAGATTAGCTGGGATTTCGGACAAGGTCATGCCTTCAGCTGTTTGTCCTACTCAAAGCCAAAACTTGAGAATTTTCCAAACTGACGATTTGCCCAAGACTGTTGTAAGGACACTGAATCTATGGTCAAATCCCACAGGGATGGATTTTCACCCTGTTCATCAAATGCTACTTCTAGTTGGAACCAATCTTGGAGACATAAGTTTGTGGGACGTTAGTTCAATGGAGAGGTTGTTTGCAAAAAATTTTCAGGTATGGGATATTGGTGCAAGTTCAATGACATTAAAGGCAACTCTAGTCAAAGATCCATCTGTTCAAGTAAGGCGTATATTGTGGAACCCTAAAGGCTCTCTATTCGGGGTTGCATATTCCAAACACATGGTTCAGTTGTACTCCTATTACAATGCAAATGACATACGCCCACATTTGGAGGTTGAAGCCCATGTTGGAAGTGTAAACGATCTGGCATTTTGTAGTCCCGCAACGAAACCATGTTTGCTATCTTGTGGTGATGACAAAACCATTAAGCTTTGGGATGCTGCCACTGGAGCAAGAGTTCGCAATTTTGAAGGACATGACGGACCAGTATATTCTGTTTGCCCACATTATAAGGAAAACATTCATTTTCTGTTTTCCACTTCAGTGGATGGAAAAATTAAAGCATGGTTATATGACATGATGGGCTCAAGGGTTGACTTTGAAGCTCCTAGTCGATCCTGCACAACAATGGCTTACAGTGCTGATGGGAGAAGGCTATTTTCCTGTGGGACGACTAAAGATGGGGAGTCACATATCGTTGAATGGAATGAGAAAGAAGGTACTGTCAAAAGAGCATACCAAGGAATCCATAAGCAATCTTTAGGTATCATTCAGTTTGACATGACCAAGAATCGGTTCTTGGCTGTTGGTCATGACTATTCAATAAAATTCTGGGACATGGATAACATTAATCTTTTGACAAGCATCGACGCTGAAGGAGGACTACCAGCAAGTCCTCGAATCCGATTTAACAAGGATGGCACCTTATTGGCTGTTACTGCTAATGACAACAAAATTAAAGTGCTTGCAACAGTTAACGGTCTGCGTTTGATGCGTCAGATTAAGAATGGTGACAAACGAACTTTTGACGATGTAAAACCTAAATTGATAAAGGGACAGGTGCCACCTAAGGTCTGGAAGTTTGCTGAAATTAACGAAGCTGCTCAATTTAGGATGCTAAGACTTGCAACGAGTGTCAGGATAGACAAGATCTCAAGGTTGATTTACGCCAGTTCAGGAAATGGGATTTTAGCATTAGCATCAAATGCTATCCATTTATTTTGGAAGTGGCCTCGTAGCGATGGTAATCCAATGGGCAAGGCGACTACCAAGGTTACTCCTCAGGTTGTTCAGCCGATGCCGGGCACAATAATGACCAATGACTTAACTGACAGTATCGCTGTAGAAGCTGTGCCCTGCTTTGCTTTGTCTAAGAATGATTCCTATCTTATGTCAGCATCTGGAGGGAAAGTTTCTTTGTTCAATATGCTGACATTCAAGGTAATGACAACTTTTATGTGCCCACCACCGGCAGCAACATGCCTTGCTTTCCATACTGTGGACAACAACACTATTGCTGTTGGTACAGATGATCATAATATCCACATATATAATGTTCGCACAGATCAGGTAAGCCATAGGTTAAAGGGTCACTCCAAAAGAATCAGTGGCCTTGCTTTTTCTCACGGTCAGAATGTGCTCATTTCTTCTGGGGAAGACACTCAGATTATTCACTGGAACTCAGATAGTTGGGAAAAAGAGAATAGTACCTTCTTGCAAATTCCAGAAAGAAGGACGGCTAGGACACATCCAGTTAAATTAGACACCTCTGTTCAGTTTCATCAGGATCAAATACATTTCCTTGTTGCACATGAGAGTCAGCTAGCTATATATGAAACATCCAAGCTTCAATGTGTCAAACAATGGGTTGTAGGAGAGTTTTTGGCACCGATTTCTCATGCAGCATTCTCGTGCAATAGCCAGTTAATCTATACCAGCTTTGTAGATGGAGTAATACTGATATTTACCACTTCAAATCTCCAGCTGCTGTCCCAGATTAATCCCAGTGCTTATCTTGGTTCTTCTCATGTCAGAGGTTGTGGCCTATACCCTGTTGTGATAGCTGCTAATCCGCTTGATCCAAACCAGTTTGCCATAGGGTTAACTGATGGTGGGGTTCTAGTCATTGAGCCACTTGAATCTGAAAGCATATGGGGCATGCCCCCACCAGTTGAGAATGGATCATCAAACCCTAACGTACCATCAAATCCTGCCTCTCAATTTGTTGACCTCGTGGTTGGTGGTTAA 3123 0.4204 MAAKGISWVRYVTVNRVLWLCLCLNASLFLSSLISRQDSETLAGLFFNFKYFEEQVLNGNWDEAERYLLGFTKFDDNKFSMKVIFEVRKQKYLEALDKLDRAKAVDILVNDLRVFSSFDEDLFKEITQLLTLDNFRENSCLSHYRDTKTARELMVAEVKRLIELNPLFRDKLEFPHIRTSRLRTLINQSLNWQHSLCVKPVQNPDIATLFHDHTCRSSSDPLAQMSASNQFIAPTSRVEGFHPIGAMAKGVGGPDDMCMMRLAGISDKVMPSAVCPTQSQNLRIFQTDDLPKTVVRTLNLWSNPTGMDFHPVHQMLLLVGTNLGDISLWDVSSMERLFAKNFQVWDIGASSMTLKATLVKDPSVQVRRILWNPKGSLFGVAYSKHMVQLYSYYNANDIRPHLEVEAHVGSVNDLAFCSPATKPCLLSCGDDKTIKLWDAATGARVRNFEGHDGPVYSVCPHYKENIHFLFSTSVDGKIKAWLYDMMGSRVDFEAPSRSCTTMAYSADGRRLFSCGTTKDGESHIVEWNEKEGTVKRAYQGIHKQSLGIIQFDMTKNRFLAVGHDYSIKFWDMDNINLLTSIDAEGGLPASPRIRFNKDGTLLAVTANDNKIKVLATVNGLRLMRQIKNGDKRTFDDVKPKLIKGQVPPKVWKFAEINEAAQFRMLRLATSVRIDKISRLIYASSGNGILALASNAIHLFWKWPRSDGNPMGKATTKVTPQVVQPMPGTIMTNDLTDSIAVEAVPCFALSKNDSYLMSASGGKVSLFNMLTFKVMTTFMCPPPAATCLAFHTVDNNTIAVGTDDHNIHIYNVRTDQVSHRLKGHSKRISGLAFSHGQNVLISSGEDTQIIHWNSDSWEKENSTFLQIPERRTARTHPVKLDTSVQFHQDQIHFLVAHESQLAIYETSKLQCVKQWVVGEFLAPISHAAFSCNSQLIYTSFVDGVILIFTTSNLQLLSQINPSAYLGSSHVRGCGLYPVVIAANPLDPNQFAIGLTDGGVLVIEPLESESIWGMPPPVENGSSNPNVPSNPASQFVDLVVGG 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1894 1040 Gene3D - 262 490 IPR015943 GO:0005515
Bisa05g1894 1040 ProSiteProfiles Trp-Asp (WD) repeats profile. 404 447 IPR001680 GO:0005515
Bisa05g1894 1040 ProSiteProfiles Trp-Asp (WD) repeats profile. 542 580 IPR001680 GO:0005515
Bisa05g1894 1040 Gene3D - 493 633 IPR015943 GO:0005515
Bisa05g1894 1040 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 41 1021 IPR027728 GO:0006355
Bisa05g1894 1040 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 820 852 - -
Bisa05g1894 1040 Gene3D - 737 1016 IPR015943 GO:0005515
Bisa05g1894 1040 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 282 459 IPR011044 -
Bisa05g1894 1040 SMART ctlh 45 103 IPR006595 -
Bisa05g1894 1040 SMART WD40_4 485 528 IPR001680 GO:0005515
Bisa05g1894 1040 SMART WD40_4 291 330 IPR001680 GO:0005515
Bisa05g1894 1040 SMART WD40_4 351 391 IPR001680 GO:0005515
Bisa05g1894 1040 SMART WD40_4 907 948 IPR001680 GO:0005515
Bisa05g1894 1040 SMART WD40_4 731 767 IPR001680 GO:0005515
Bisa05g1894 1040 SMART WD40_4 531 571 IPR001680 GO:0005515
Bisa05g1894 1040 SMART WD40_4 397 438 IPR001680 GO:0005515
Bisa05g1894 1040 SMART WD40_4 813 852 IPR001680 GO:0005515
Bisa05g1894 1040 SMART WD40_4 770 810 IPR001680 GO:0005515
Bisa05g1894 1040 SMART WD40_4 441 482 IPR001680 GO:0005515
Bisa05g1894 1040 SMART WD40_4 574 615 IPR001680 GO:0005515
Bisa05g1894 1040 SUPERFAMILY WD40 repeat-like 399 852 IPR036322 GO:0005515
Bisa05g1894 1040 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 681 1010 IPR011047 -
Bisa05g1894 1040 ProSitePatterns Trp-Asp (WD) repeats signature. 425 439 IPR019775 -
Bisa05g1894 1040 ProSiteProfiles Trp-Asp (WD) repeats profile. 820 861 IPR001680 GO:0005515
Bisa05g1894 1040 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 46 103 IPR006595 -
Bisa05g1894 1040 Pfam WD domain, G-beta repeat 404 438 IPR001680 GO:0005515
Bisa05g1894 1040 Pfam WD domain, G-beta repeat 816 852 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1894 Bisa-ChrBisa05 37424018 37431545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1894 385 599 Miscellaneous Gene Families AT5G08390 28.054 6.16e-09 58.2