Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1889 ATGGGGAAGCCCACTGGTAAGAAGAAGGATCCGGTAGCCCAGAAGGTTGCAAATGCAAACGGCAAGCAGAGCAAGCCCTCTGAGAGGACTTCCAAAGCTTTTGACGAAGACACAGCAATCTTTATCAATATGTCACAAGATCTCAAGGAAGAAGGTAATAGACTCTTTCACAAGAGGGACCACGAAGGTGCTATGCTGAAGTATGAGAAGGCCCTCAAGCTCCTTCCCGGAAACCACATAGATGTGGCACACTTGCGTACCAATATGGCTGCGTGTTATATGCAACTTGGTCTTGGAGAGTATCCTCGAGCGATTAACGAATGTAATTTAGCACTGGAAGTATCACCCAGATATAGTAAGGCTCTGTTAAGAAGAGCTAAGTGCTATGAAGCACTGAATCGATTCAATTTGGCACTGAGAGATGTTAATTCTGTTTTGAGTGTGGAGCCTAATAATCTTAATGCACTGGAGATTCATGAGAGTTTGAAAAAAACCATGGAAGAAAAAGGCATCACTATTGATGAGAAAGAGATTTGTTTGGCTAGGATAGAGCGGCCTCCTGCAGCTCCAATGCGTAAAGTGGTAAGAGAAAAACTAAAGAAAAAGAAAAGTAAAAAAGCCGAGGAGAGGGCACAGGATAAGGTGGTTATTAAGGAGGATGGGAGTGCTGTTAAAGATAGAAAAGTGGTGACCAAATCAATTGAGAAAGAAAAAGTGGTAATGGAACCTGTTAAGGTAGAAAAAGTGGTCACGACGACAGTGAAGTTGGTATTTGGAGAGGACATAAGGTGGGCACAGTTGCCGGGGAATTGTAGTATGATTTTGGTAAGGGATATAATTAGGGATCGATTTCCAGGCTTGAATGGTGTTCTTGTGAAATATAGGGATCAAGAAGGTGATTTGGTCACTATCACTACTACTGATGAATTGAGATTAGCTGAATCTTCAGGTGATGTGCTAAGTTCACTTCGGCTCTATATTACGGAAGTCAATCCAGACCAGGAACCATCTTATGATGGAAAAACAAATGGAGATGACATGCGAGGTGATGGTATTGAGCAGCGGGCTATGGAAGAAGGCAAAAATTTAGCCAATAGGATGACTACTGTGGAGGAATGGTTAATCCAGTTTGCAAGGCTGTTCAAGAACCACGTTGGGTTTGATTCTGATTCATATTTGGATATTCATGAGGTGGGAATGAAGCTATATTCAGAAGCATTGGAGGATGTGGTAACAAGTGAGGATGCTCAACAACTTTTTGAAATTGCGGCAGTTAAATTTCAAGAGATGGCAGCTTTAGCATTATTTAATTGGGGGAATGTTCACATGTCCAGGGCAAGGAAGCAGGTTTCTTTTTCAGAGGATGGGCCAAGGGAATCTTCTTTTGAGCATATTAAAGCTGCATATGAGTGGGCACGGAAGGAGTATATGAAAGCAGAAACGAGATATGAAGAAGCCTTGAAAATCAAACCAGACTTCTATGAAGGATATCTAGCTCTTGGCCATCAGCTGTTTGAGCAAGCAAAGCTATGCTGGTATTATTCAATTGCATGCAAGATGGATTTGACAGACGGCCCTTCTAGTGAGGTTCTACTGCTCTACAACAAGGCCGAGGATAGCATGGAGAAAGGGATGTTGATGTGGGAGGAGATTGAAGAGAAGCGTTTAAATGGACTATCTGAAGTAGATAAATATAAAGCACAGTTGGAAAAAATGGGCTTAGATAGTCTCCTCAAGGATATTTCTTCTGATGAAGCAGCAGAGCAGGCTGCAAATATAAGGTCACAAATATATATTTTATGGGGTACCTTATTGTATGAGCGTTCTGTTGTGGAATATAAGATAGGTTTACCAACTTGGGAGGAATGCTTGGAGGTTGCAGTTGAGAAGTTTGAACTTTCTGGAGCTTCTCCAACAGATATAGGTGTCATGATAAAGAACCATTGTTCCAATCAAACAGCACTAGAAGGTTTGGGGTTCAAGATTGATGAGATAGTACAGGCGTGGAATGAAATGTATGATGCCCAGAGGTGGCAGTTTAGTGTTCCATCATTTCGACTTGAACCATTGTTTCGTCGACGTGGTCCAAAACTTCATGACATCTTGGAGCATTTTTAA 2118 0.4178 MGKPTGKKKDPVAQKVANANGKQSKPSERTSKAFDEDTAIFINMSQDLKEEGNRLFHKRDHEGAMLKYEKALKLLPGNHIDVAHLRTNMAACYMQLGLGEYPRAINECNLALEVSPRYSKALLRRAKCYEALNRFNLALRDVNSVLSVEPNNLNALEIHESLKKTMEEKGITIDEKEICLARIERPPAAPMRKVVREKLKKKKSKKAEERAQDKVVIKEDGSAVKDRKVVTKSIEKEKVVMEPVKVEKVVTTTVKLVFGEDIRWAQLPGNCSMILVRDIIRDRFPGLNGVLVKYRDQEGDLVTITTTDELRLAESSGDVLSSLRLYITEVNPDQEPSYDGKTNGDDMRGDGIEQRAMEEGKNLANRMTTVEEWLIQFARLFKNHVGFDSDSYLDIHEVGMKLYSEALEDVVTSEDAQQLFEIAAVKFQEMAALALFNWGNVHMSRARKQVSFSEDGPRESSFEHIKAAYEWARKEYMKAETRYEEALKIKPDFYEGYLALGHQLFEQAKLCWYYSIACKMDLTDGPSSEVLLLYNKAEDSMEKGMLMWEEIEEKRLNGLSEVDKYKAQLEKMGLDSLLKDISSDEAAEQAANIRSQIYILWGTLLYERSVVEYKIGLPTWEECLEVAVEKFELSGASPTDIGVMIKNHCSNQTALEGLGFKIDEIVQAWNEMYDAQRWQFSVPSFRLEPLFRRRGPKLHDILEHF 705
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1889 705 PANTHER PROTEIN CLMP1 1 704 IPR044517 -
Bisa05g1889 705 Pfam PB1 domain 251 328 IPR000270 GO:0005515
Bisa05g1889 705 ProSiteProfiles TPR repeat profile. 119 152 IPR019734 GO:0005515
Bisa05g1889 705 MobiDBLite consensus disorder prediction 1 32 - -
Bisa05g1889 705 ProSiteProfiles TPR repeat profile. 45 78 IPR019734 GO:0005515
Bisa05g1889 705 SUPERFAMILY CAD & PB1 domains 249 338 - -
Bisa05g1889 705 SMART PB1_new 251 330 IPR000270 GO:0005515
Bisa05g1889 705 CDD PB1 252 327 - -
Bisa05g1889 705 SUPERFAMILY TPR-like 423 667 IPR011990 GO:0005515
Bisa05g1889 705 Gene3D Tetratricopeptide repeat domain 399 571 IPR011990 GO:0005515
Bisa05g1889 705 Gene3D Tetratricopeptide repeat domain 43 172 IPR011990 GO:0005515
Bisa05g1889 705 Gene3D - 254 330 - -
Bisa05g1889 705 Coils Coil 192 212 - -
Bisa05g1889 705 SMART tpr_5 83 118 IPR019734 GO:0005515
Bisa05g1889 705 SMART tpr_5 460 493 IPR019734 GO:0005515
Bisa05g1889 705 SMART tpr_5 45 78 IPR019734 GO:0005515
Bisa05g1889 705 SMART tpr_5 119 152 IPR019734 GO:0005515
Bisa05g1889 705 ProSiteProfiles PB1 domain profile. 251 330 IPR000270 GO:0005515
Bisa05g1889 705 SUPERFAMILY TPR-like 45 508 IPR011990 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa05g1889 Bisa-ChrBisa05 36868118 36870328 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1889 28 168 Calmodulin-binding Proteins AT3G25230 31.373 4.36e-09 57.8
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1889 05 36868118 36870328 Bisa09g1169 09 16928869 16931018 CCT