Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1875 ATGCACCATCAGTCCAGCACCATACAATATGTATTTTCGTTTTTCTTAAGGCTCATCACTTTTTCCTGGAAAATTGAAACTTCATTAGCACAAGGCCCAGATACAGACGATGTAGCTGGGCTACTCAGAAATAAACAAGGACAGACCCACTCTTCTGTTTTGACAAACGTAATAACAAGGCCCACATACCCTTCTAAAATCCGCAGACAAAAGCCCAAAATACAGTAGGTTTTCGTCTTCGGTGGATCCTCAGTTGCACATTCGGCGCCGTCCATCTCCACAGGCGAAGCGAAAATGCCGTCCCACAAGACCTTCAGAATTAAGAAGAAGTTGGCGAAGAAGATGAGGCAGAATAGGCCTATTCCCTATTGGATCCGCATGAGGACCGACAACACCATCAGGTACAATGCCAAGCGCCGTCACTGGCGTCGCACCAAGCTTGGATTCTGA 450 0.4667 MHHQSSTIQYVFSFFLRLITFSWKIETSLAQGPDTDDVAGLLRNKQGQTHSSVLTNVITRPTYPSKIRRQKPKIQXVFVFGGSSVAHSAPSISTGEAKMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1875 149 SUPERFAMILY Ribosomal protein L39e 101 148 IPR023626 -
Bisa05g1875 149 Pfam Ribosomal L39 protein 107 147 IPR000077 GO:0003735|GO:0005840|GO:0006412
Bisa05g1875 149 Hamap 50S ribosomal protein L39e [rpl39e]. 99 149 IPR000077 GO:0003735|GO:0005840|GO:0006412
Bisa05g1875 149 ProSitePatterns Ribosomal protein L39e signature. 128 144 IPR020083 GO:0003735|GO:0005840|GO:0006412
Bisa05g1875 149 PANTHER RIBOSOMAL PROTEIN L39E 91 149 - -
Bisa05g1875 149 FunFam 60S ribosomal protein-like L39 99 149 - -
Bisa05g1875 149 Gene3D Ribosomal protein L39e 99 149 IPR023626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1875 Bisa-ChrBisa05 35947581 35948480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1875 99 149 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 90.196 6.12e-29 99.0