Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1872 ATGGAAAAACAGAGGAAGGAGGCATGCCTCCACCAATCCGATGAAGAGCACCAAGAAAAGAGGGTCAAGACAGAAACTTTATTAGATCTGAATTCATCCAGGCATGATTCTGTTAATGGGTTCAATCCCGAACTCAACCTCATCAAATGCTTCGATACAGATTCATCAAAACCATCATCAGAAAACAGAGACTTTCCTGGTTCTGCAGCAGGACCGCGGTTCTTCTCGTGCAACTACTGCCAGAGAAAGTTCTACAGCTCGCAAGCTCTTGGGGGGCACCAGAATGCGCATAAGAGAGAGAGGTCAATGGCGAAGAGAGGACAGAGGGTGGGGATTACAGAGGCTTATGGTTATGGAATTCGGTTTCTGCATAACTATGGTGGGTTTTCGAGCGTGGCGTGTCTTCCTCTTCATAATAGGCCTCTGGCGATTCAGGCTCACTCTCTGATCCACAAGAACAGTAATAGGCCTTTCATGGATCCGCAGCCTGGGATAGGGAAGCTGGAGATGGCAAGGTTTCACAGAACGACGTCGTCTGCTGTGGGGAGGTTAGGAATTGTGAAGGCTGTGATGGGTTCTGCAGAAGAAATGAAGCACCTTGATTTGTCCCTCAAGCTCTAG 621 0.4831 MEKQRKEACLHQSDEEHQEKRVKTETLLDLNSSRHDSVNGFNPELNLIKCFDTDSSKPSSENRDFPGSAAGPRFFSCNYCQRKFYSSQALGGHQNAHKRERSMAKRGQRVGITEAYGYGIRFLHNYGGFSSVACLPLHNRPLAIQAHSLIHKNSNRPFMDPQPGIGKLEMARFHRTTSSAVGRLGIVKAVMGSAEEMKHLDLSLKL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1872 206 Gene3D Classic Zinc Finger 62 115 - -
Bisa05g1872 206 ProSitePatterns Zinc finger C2H2 type domain signature. 77 97 IPR013087 -
Bisa05g1872 206 MobiDBLite consensus disorder prediction 1 23 - -
Bisa05g1872 206 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 3 187 IPR044246 GO:0009788
Bisa05g1872 206 ProSiteProfiles Zinc finger C2H2 type domain profile. 75 102 IPR013087 -
Bisa05g1872 206 SUPERFAMILY beta-beta-alpha zinc fingers 71 103 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1872 Bisa-ChrBisa05 35636027 35636647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1872 1 206 C2H2 Transcription Factor Family AT5G10970 36.471 1.01e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa05g1872 None None None