Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1868 ATGACCGTAGAAACCAGAACGGATCAACCCAGAGGGCAGTTTCCGGTGGGAATGCGAGTGCTTGCCGTCGACGACGACCCAACTTGCCTGTTGGTGTTGGAAACTCTGCTTCGGAGATGCCAATACCACGTTACAACTACTAATCAGGCTATAACAGCCTTGAAGATGTTAAGAGAAAACAAGAACATGTTCGACCTGGTTATTAGTGATGTTCATATGCCAGACATGGATGGCTTTAAGCTGCTTGAGCTTGTTGGACTTGAGATGGACCTACCAGTCATAATGTTGTCTGCAAATGGTGACACAAAGCTGGTGATGAAGGGGATCACTCATGGTGCTTGTGATTATCTTCTGAAACCCGTTCGAATCGAGGAGCTAAAGAACATATGGCAGCATGTGATTCGGAGGAAGAAGTTTGATTCAAAGGACAAGAACAACACCTGCAATCAAGACGCGCCTCATTCTGGTACCAACAATGGACTAGGTTCAGCAGGAACAGGAAATTCAGACCAAAATGGAAAGCTGACCAAAAAAAGGAAGGATCAGGATGACGAAGACGACGAGGAACACGAGACTGGCCATGACAATGAGGACCCTTCAACCCAGAAGAAGCCTCGTGTCGTCTGGTCTGTTGAGCTCCACCGCAAATTCGTTGCTGCTGTTAATCAATTAGGCATTGACAAAGCTGTACCTAAAAAAATTCTGGACTTGATGAATGTTGAGAAGCTGACTAGGGAGAATGTGGCAAGCCATCTCCAGGCAATTCTCTTATCCCTTCTGAAATACAGGCTGTATCTGAAAAGAATTAGCTGTGTGGCGAACCAGCAAGCTAATATGGTGGCAGCCTTAGGAAGTGCAGATGCGTCCTATTTGAGAGTGGGATCTCTGGGTGGGATCAAACATCTTCCACCACTGAGTAGCTCTGGACAGTTTCAGAACAATGTTTTCAGATCCCTCCCAGTCCCATATGGTGGGATGATGGGAAGATTGAACACTCCGGCTGGTCTCGGTGTCCACGGGCTGCCTTCATCAGGAGTTCTTCATTTGGGTCATGCACAAAATCTAAACAACTCCATGAATGATCCTCTCAAATTCCAGCCAGCCATGGCTCACCATGTGAATCAGCATGGTGGTTCAATCCAGGGAATGCCAGTAGTATCTGTAGGGCTTGATCAATTACATCCCAATAAGGACATTTCTCCCATATCAAATATGCTTCCAGATCCAAGAACAAGAGTAGCCTCAGGCTGCTCAAGAACTCCACTCACAAACAATGGCTTGATGGTAGAACCAAATCATCCTCAAGAAACACAAGGGCTAAGAGGGTATGAGAATCTACCTTCACTGACCTCTCGGCATCCTGAATTTTCTCTGCCTTTGTTGGAGAATAATAATGGCCGGTGTACCGATAACTGGGCTAGTGCTGTACAATCCTCTGGGATGCACACAAGTTCTTACTCAACAAATGAATGTTTTCATGTGGGAAATCCAAGTGGTTCTTCTTCCGTCACTTCACTCTCCACTCAGTCCCATGATTCAATGCCAATGGCAGATAATATGCATTCCCAAGCTCCCATTTTCACTAACAGTACACCCAATGCATCATTTCAAGTGTGGGATGATCATTCATTGGACTCTATGATCCCTGTAAATGGTGCTGTGGGTTCATCATCATCAGGCTTCCAGAGAAACTTGGACTTCAATTTTGGAAACCCCTCAGAAATGAAGCAGGAGGGGGTCACAAAATCAGCTCAAGATACGTTGTTGAAGCCAAATCAGGGTTATCACATGGACCCCCATAAGCCACAACGAAGTCGAGTCTCTAACAATCTTGGCTCATTGGAAGACCTAGTCAGTGCAATGATGAAACAGGAGCAGGATAAGGTGAAGCTGGTGGATGGAGACTTCCTATGTGATGATTTCACGGGAGGAACATCCATGTGA 1944 0.4588 MTVETRTDQPRGQFPVGMRVLAVDDDPTCLLVLETLLRRCQYHVTTTNQAITALKMLRENKNMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDTKLVMKGITHGACDYLLKPVRIEELKNIWQHVIRRKKFDSKDKNNTCNQDAPHSGTNNGLGSAGTGNSDQNGKLTKKRKDQDDEDDEEHETGHDNEDPSTQKKPRVVWSVELHRKFVAAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQAILLSLLKYRLYLKRISCVANQQANMVAALGSADASYLRVGSLGGIKHLPPLSSSGQFQNNVFRSLPVPYGGMMGRLNTPAGLGVHGLPSSGVLHLGHAQNLNNSMNDPLKFQPAMAHHVNQHGGSIQGMPVVSVGLDQLHPNKDISPISNMLPDPRTRVASGCSRTPLTNNGLMVEPNHPQETQGLRGYENLPSLTSRHPEFSLPLLENNNGRCTDNWASAVQSSGMHTSSYSTNECFHVGNPSGSSSVTSLSTQSHDSMPMADNMHSQAPIFTNSTPNASFQVWDDHSLDSMIPVNGAVGSSSSGFQRNLDFNFGNPSEMKQEGVTKSAQDTLLKPNQGYHMDPHKPQRSRVSNNLGSLEDLVSAMMKQEQDKVKLVDGDFLCDDFTGGTSM 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1868 647 Gene3D - 200 270 - -
Bisa05g1868 647 SMART REC_2 18 130 IPR001789 GO:0000160
Bisa05g1868 647 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 338 IPR045279 GO:0009736
Bisa05g1868 647 CDD REC_typeB_ARR-like 20 134 - -
Bisa05g1868 647 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Bisa05g1868 647 MobiDBLite consensus disorder prediction 140 205 - -
Bisa05g1868 647 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 201 260 IPR017930 -
Bisa05g1868 647 SUPERFAMILY CheY-like 17 139 IPR011006 -
Bisa05g1868 647 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Bisa05g1868 647 FunFam Two-component response regulator 18 204 - -
Bisa05g1868 647 PIRSF RR_ARR_type-B 1 646 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bisa05g1868 647 Gene3D - 17 154 - -
Bisa05g1868 647 FunFam Two-component response regulator 200 270 - -
Bisa05g1868 647 SUPERFAMILY Homeodomain-like 201 258 IPR009057 -
Bisa05g1868 647 MobiDBLite consensus disorder prediction 148 172 - -
Bisa05g1868 647 NCBIfam myb-like DNA-binding domain, SHAQKYF class 204 254 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1868 Bisa-ChrBisa05 35499261 35502678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1868 1 642 Response Regulator Gene Family AT2G25180 44.640 3.68e-132 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Bisa05g1868 Response_reg 7.6e-23 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1868 05 35499261 35502678 Bisa09g1143 09 16675215 16678625 CCT