Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1863 ATGGCAAAGTATCACCGGAACAACGTCGGATCTCTGGTTCTTAACCATCACGATCCTACCAGGAATGCCACAGTCGGCGGCCACTTCCGCCTATGGAATGCCTTGTCCGCTTCCTCAATTCGGCGCATCATATTTGACGCAATCAGCTGCGGCGGTGGCTCTCGGCATCACCGCCACCGCCACCACCACAGCGACTTCACCTCCACCGACTCGGTGACGACATCGGCTTCCAAGAACTCGAAAGAGAAGTCGCAAGAGCAGGGGCAGGGAGTCTCCAAGTTCCAACCGAAACCGAATGCGAAGTTGGAGAAACTTTCGGATCTTCTGAATATATCGGAGTCTGAAATTGACTCCCAAACGAAGAAGAAGGAAGAGGCATTCAAGGAGCTGAAGAGAATTGTGAAGGAGTTGCAGGGTGAGGATTTGACGAAGCGGCAAATGGCCGCGGCCAGCGTGAGACAACTCGCGAAGGAGGACTTGGAAGCCAGAGCAACACTAGCAATGCTTGGAGCGGTTCCTCCTCTAGTTCAAATGCTTGATTTGGAAGACGCTAGTTCTCAGATCTCTTCGCTCTATGCGTTACTCAATCTCGGGATCGGCAACGACGCAAGTAAAGCAGCCATTGTCAAAGTTGGTGCTGTTCACAAGATGCTAAAACTCATTGAATCACCAATTACTCCAGATTCATCAGTCTCTGAAGCTATTGTTGCAAACTTCCTTGGTTTAAGTGCTTTGGATTCGAATAAACCAATAATTGGATCTTCGGGCGCGATACCATTCCTTTTTAGAACCCTTGAAGATAATAAAACTACCCTCCAAGCTAAACAAGATGCTATTCGAGCACTGTACAATCTTTCAATCTTCCCAACCAATATCTCATTCATTTTAGAAACAAACTTGGTCCCGTTTCTGATAAACACCATAGGAGACATGGAAGTAAGTGAAAGAATCCTCTTAATCCTAAGCAATTTGGTATCAACTCCGGAGGGTCGAAAAGCTATCAGTGTCGTGCGTGATGCTTTCCCAATTCTGGTTGATGTATTGAATTGGACGGATTCACCTGGATGCCAGGAAAAAGCATCATACATTTTGATGATTATGGCACACAAAGCCTATGGTTATAGGCAGGCCATGATTGAGGCAGGTATTATGTCATCATTGCTTGAATTGATGCTTCTGGGTACTGCCTTGGCACAGAAAAGGGCCTCAAGGATATTGGAATGCTTGAGGATGGACAAAGGGAAGCAGGTGTCTGGGAGTTGCAGTGGAAACTTTAGTTCAACTGTTTCTGCTCCCATTTGTGGCTGTTCATCGTCTTGTACAAAGCCAGATGGAGGTGGAAATGAGTGTTTGAAGGAGGAAGAGGATGATATGATGAGTGACGAGAAGAAAGCAGTGAAGCAATTAGTCGAGCAGAGTTTACAATACAACATGAAGAAAATTTTGAAGAGGGCCCATTTGCCTCAAGATTTCGTTCCATCTGAGCATTTTAAGTCACTCACCTCAAGTTCGACTTCAAAGAGCCTGCCATTTTGA 1536 0.4609 MAKYHRNNVGSLVLNHHDPTRNATVGGHFRLWNALSASSIRRIIFDAISCGGGSRHHRHRHHHSDFTSTDSVTTSASKNSKEKSQEQGQGVSKFQPKPNAKLEKLSDLLNISESEIDSQTKKKEEAFKELKRIVKELQGEDLTKRQMAAASVRQLAKEDLEARATLAMLGAVPPLVQMLDLEDASSQISSLYALLNLGIGNDASKAAIVKVGAVHKMLKLIESPITPDSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLFRTLEDNKTTLQAKQDAIRALYNLSIFPTNISFILETNLVPFLINTIGDMEVSERILLILSNLVSTPEGRKAISVVRDAFPILVDVLNWTDSPGCQEKASYILMIMAHKAYGYRQAMIEAGIMSSLLELMLLGTALAQKRASRILECLRMDKGKQVSGSCSGNFSSTVSAPICGCSSSCTKPDGGGNECLKEEEDDMMSDEKKAVKQLVEQSLQYNMKKILKRAHLPQDFVPSEHFKSLTSSSTSKSLPF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1863 511 Gene3D - 126 410 IPR011989 -
Bisa05g1863 511 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 256 286 IPR000225 GO:0005515
Bisa05g1863 511 MobiDBLite consensus disorder prediction 52 97 - -
Bisa05g1863 511 Coils Coil 102 140 - -
Bisa05g1863 511 SMART arm_5 159 199 IPR000225 GO:0005515
Bisa05g1863 511 SMART arm_5 201 244 IPR000225 GO:0005515
Bisa05g1863 511 SMART arm_5 245 287 IPR000225 GO:0005515
Bisa05g1863 511 SMART arm_5 288 326 IPR000225 GO:0005515
Bisa05g1863 511 MobiDBLite consensus disorder prediction 68 94 - -
Bisa05g1863 511 SUPERFAMILY ARM repeat 129 409 IPR016024 -
Bisa05g1863 511 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1863 Bisa-ChrBisa05 35292862 35294894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1863 125 410 U-box Gene Family AT2G23140 31.359 7.90e-31 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1863 05 35292862 35294894 Bisa09g1137 09 16560019 16562046 CCT