Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1855 ATGTTCAATAGAACGTCATCGTTTCAAGATTTCCCACTAGAGCACACGATGAGGCTGCTCCATCATGTGCGGGGGAAGGGGTGGGCTCGCACGGTGTGGTCTTTGATGACTTGGAAAGCCACAGCAATCAGAATCTCTGCTTTTCTCTGTACAAAACCCAATCAATGTTCTTATCCTATTTCGGCGAAAAGGGGTTTACCGAGCGTACAATCTGAGAATCAAGTCTCAGTTATGTCATCATCAGCTTCAGAATCAGGATCAACAGTGGAGGAGAGAAACATAGTGTTTGGGCGGTACGAAATGGGGAGGCTTCTGGGGCTAGGGACTTTCGCGAAGGTGTATTACGGCAAACACATAGCAACCGGCAAAAGCGTCGCGATCAAAGTGATAAGCAAAGAGAAGGTGAAGAAGGAGGGGATGATGGAGCAGATCAAGCGCGAGATTTCCATCATGCGATTGGTCCGACACCCCAACGTCGTCGAGCTCAAGGAAGTCATGGCCACGAAGACCAAGATCTTCTTCGTCATGGAATACGTTCGCGGCGGCGAGCTCTTCGCCAAGGTCGCGACCGGCAAACTCAAGGAGGATCTCGCTCGCAAGTACTTCCAGCAATTGATCGGCGCCGTCGATTTCTGCCACAGCAGAGGCGTTTCGCACCGAGATTTGAAACCGGAAAATTTGTTGCTCGACGACGACGGAAATCTCAAGATCTCCGATTTCGGTTTATCGTCTTTGCCGGGGCAGCTCCGGTACGACGGTCTCCTCCACACGCAGTGCGGAACTCCGGCTTATATTGCCCCTGAGGTTTTGAGAAAGAAAGGTTACGATGGATCGAAGACTGATATTTGGTCATGTGGAGTGATCCTGTACGCATTGCTCGCTGGATTTCTTCCTTTTCGAGAGGACAATCTCATGACTATGTACGCGAAGGTTTTCAAAGGCGAATTCAAATTTCCTCAATGGTTTTCCCCGGATTCGAAGAGATTGATCTCGAAAATTCTCGTGCCGCAATCAGAGAAGCGAGCATCGATCGCTGAAATAATGCGGGACCCATGGTTTCGAAAGGGATTTTCGATCGCATCTGCGTTTCAATTACAAGAAACTGCTTCGAAAAATGGGGAAGAAGATTCCAGAACCAATAAGCTTTCAGCGCCAAAGTCTTTCAATGCGTTCGAATTCATCTCGTCCATGTCTTCAGGGTTTGATTTGTCTGGATTGTTCGAGGAGAAGAGGAAGAGCGGGTTGGTGTTCACGTCGAAGTGTCCGGCGACGGTGATTATGTCGAAGATCGAGACGGCGGCGGAGGGGCTAAGCTTCAGAGTGGTGGAGGTGAAGGACTTCAAAATCAGGCTAGATAGGCGGTCGGAGGGGAGAAAGGGGAGATTGTACGTGACGGCGGAGGTGTTCGAGGTGGCGCCGGAAGTCGCCGTCGTGGAGTTTTCGAAATGTTCCGGCGACACATTGGAATATGCCAAGTTTTGCGAGGAAGATGTTAGGCCTGCGCTGAAAGATATTGTTTGGACATGGCGAGGTGATACCACGTGTAACGGTCGTTTGTAA 1560 0.5 MFNRTSSFQDFPLEHTMRLLHHVRGKGWARTVWSLMTWKATAIRISAFLCTKPNQCSYPISAKRGLPSVQSENQVSVMSSSASESGSTVEERNIVFGRYEMGRLLGLGTFAKVYYGKHIATGKSVAIKVISKEKVKKEGMMEQIKREISIMRLVRHPNVVELKEVMATKTKIFFVMEYVRGGELFAKVATGKLKEDLARKYFQQLIGAVDFCHSRGVSHRDLKPENLLLDDDGNLKISDFGLSSLPGQLRYDGLLHTQCGTPAYIAPEVLRKKGYDGSKTDIWSCGVILYALLAGFLPFREDNLMTMYAKVFKGEFKFPQWFSPDSKRLISKILVPQSEKRASIAEIMRDPWFRKGFSIASAFQLQETASKNGEEDSRTNKLSAPKSFNAFEFISSMSSGFDLSGLFEEKRKSGLVFTSKCPATVIMSKIETAAEGLSFRVVEVKDFKIRLDRRSEGRKGRLYVTAEVFEVAPEVAVVEFSKCSGDTLEYAKFCEEDVRPALKDIVWTWRGDTTCNGRL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1855 519 FunFam Non-specific serine/threonine protein kinase 383 507 - -
Bisa05g1855 519 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Bisa05g1855 519 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 90 503 - -
Bisa05g1855 519 SMART serkin_6 99 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1855 519 CDD CIPK_C 389 503 - -
Bisa05g1855 519 Gene3D Phosphorylase Kinase; domain 1 87 178 - -
Bisa05g1855 519 Pfam NAF domain 385 441 IPR004041 GO:0007165
Bisa05g1855 519 FunFam Non-specific serine/threonine protein kinase 92 387 - -
Bisa05g1855 519 Gene3D Kinase associated domain 1, KA1 383 508 - -
Bisa05g1855 519 Pfam Protein kinase domain 99 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1855 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Bisa05g1855 519 ProSiteProfiles NAF domain profile. 383 408 IPR018451 GO:0007165
Bisa05g1855 519 CDD STKc_SnRK3 98 352 - -
Bisa05g1855 519 Gene3D Transferase(Phosphotransferase) domain 1 180 359 - -
Bisa05g1855 519 ProSiteProfiles Protein kinase domain profile. 99 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1855 519 SUPERFAMILY Protein kinase-like (PK-like) 95 368 IPR011009 -
Bisa05g1855 519 FunFam Non-specific serine/threonine protein kinase 90 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1855 Bisa-ChrBisa05 35055315 35058375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1855 73 517 CBL-interacting serine-threonine protein kinases AT5G25110 64.924 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa05g1855 Pkinase 4.7e-73 CL0016