Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1853 ATGGAATCAACAACATGCGTAGACACTTCTCTCAACCTCAACGTTGGTCCTTCTCATCATATCGATGTTGCGACAGAGGCTTTGGTGGAGGAGTTGTGTCGTTTAAGTAGTGAGAATAAGAGGCTGAATGAGAGGCTCACACGCATGTCTGAGAGCTACAGTGTGTTAGAAAAGCGTTTGAGCCAAATGGTTTCTGAGAAAGACCCAACAACAAGTACAGAAACGAGGAAGAGAAAGGCTGAAGGGAATTGTATGAATAATAATAAAATGTATGTGAGAGATGGATATCAGTGGAGGAAGTATGGTCAGAAGGTGACTAGAGATAACCCCTCTCCTAGGGCCTACTTCAAGTGCTCCCATGCTCCAAGTTGCCCTGTGAAAAAGAAGGTGCAAAGAAGCATAGAAGATCCCGCTATCTTGGTGGCGACTTACGACGGAGAACACAACCATGCGCTTGGTTCCCCCAAAAGTGAAGTCCCTGAATCCAACTCCACTCACCAGATTTTGGTTCAACAGATGACTTCTCTGATCACAAGAGATCCCAATTTCACATCAGCCCTTGCTACAGCCATTTCCGGAACAATGTTTGAGCACACCACTATTAGTGGTTAG 612 0.4526 MESTTCVDTSLNLNVGPSHHIDVATEALVEELCRLSSENKRLNERLTRMSESYSVLEKRLSQMVSEKDPTTSTETRKRKAEGNCMNNNKMYVRDGYQWRKYGQKVTRDNPSPRAYFKCSHAPSCPVKKKVQRSIEDPAILVATYDGEHNHALGSPKSEVPESNSTHQILVQQMTSLITRDPNFTSALATAISGTMFEHTTISG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1853 203 ProSiteProfiles WRKY domain profile. 87 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g1853 203 Pfam WRKY DNA -binding domain 94 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g1853 203 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 160 195 IPR044810 GO:0003700
Bisa05g1853 203 Coils Coil 39 59 - -
Bisa05g1853 203 SMART WRKY_cls 92 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa05g1853 203 SUPERFAMILY WRKY DNA-binding domain 89 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa05g1853 203 Gene3D WRKY domain 80 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1853 Bisa-ChrBisa05 34896899 34899474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1853 3 198 WRKY Transcription Factor Family AT1G80840 36.860 1.09e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa05g1853 WRKY 5.8e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa05g1853 05 34896899 34899474 Bisa09g1128 09 16350898 16353140 CCT