Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1816 ATGCAGACGATAATCACTGCAAATGTCTACCCCCCAAATCTGGTTTCAAAAAAGAGCAGAGAAGAAGATGAAGAGTTGGATGCAAGACTCAGTGCGGGCGTGATACAGAGAGAGGAAGCAGGGAAGATGAAGACAATTCTTTCTTCGGAGACCATGGACATCCCCGATGGGGTTAGCATCAAGGTGAATGCCAAAATCATTGAGGTTGAGGGACCTCGCGGCAAGCTCGTTCGAGACTTCAAACACCTTAACCTTGATTTCCAACTCATCACTGATGACAACGGCAAGAAGCTGAAGATCGAATCCTGGTTTGGATCTCGCAAGACCTCCGCGGCTATTCGCACTGCTCTTAGTCATGTGGAGAATCTCATTACTGGGGTCACCAAGGGATACCGCTACAAGATGCGGTTTGTCTATGCCCATTTTCCCATCAACGCAAGCATTGCCAATGGCAACAAGTCCATCGAGATCCGAAACTTCCTGGGTGAAAAGAAGGTGAGGAAAGTGGACATGCTTGATGGTGTTTCCGTTGTCCGGTCTGAGAAGGTCAAGGATGAGTTGGTTTTGGATGGAAATGATATTGAGCTTGTTTCTCGGTCCTGTGCTCTCATTAATCAGAAATGCCATGTTAAAAACAAAGATATCCGGAAGTTCCTTGATGGTATCTATGTTAGCGAGAAGGGGACAATTGTTGAAGAGTAG 702 0.4644 MQTIITANVYPPNLVSKKSREEDEELDARLSAGVIQREEAGKMKTILSSETMDIPDGVSIKVNAKIIEVEGPRGKLVRDFKHLNLDFQLITDDNGKKLKIESWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASIANGNKSIEIRNFLGEKKVRKVDMLDGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVEE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1816 233 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 43 231 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa05g1816 233 FunFam 60S ribosomal protein L9 43 130 - -
Bisa05g1816 233 Pfam Ribosomal protein L6 152 221 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa05g1816 233 Pfam Ribosomal protein L6 54 130 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa05g1816 233 ProSitePatterns Ribosomal protein L6 signature 2. 206 227 IPR002359 GO:0003735|GO:0005840|GO:0006412
Bisa05g1816 233 Gene3D - 43 130 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa05g1816 233 SUPERFAMILY Ribosomal protein L6 43 130 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa05g1816 233 FunFam 60S ribosomal protein L9 131 233 - -
Bisa05g1816 233 Gene3D - 131 233 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Bisa05g1816 233 SUPERFAMILY Ribosomal protein L6 131 227 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1816 Bisa-ChrBisa05 34117045 34121735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1816 43 233 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 85.492 1.19e-119 337