Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1805 ATGGCTCTGAGCAGATCCCAAAGAGTGGTCCAAGTGGACAGAGAAGGGGACTTTAGCGACGATGACGATCAACAGCAGCAGAAGAAAATCGTCGCAAAAGCGTTTCCTTTTCTGGAACTGTTGAGCTATGCCGATGCAGTTGACTGGATTCTGATGGGGTTGGGTACTTTGGGGTCTATAGTGCATGGCATGGCTTTGCCTGTTGGCTACCTGCTGCTAGGAAAAGCCCTCAATGCTTTTGGCAATAATATTGGTGACACTGATGCCATGGTTGTAGCTCTTAAAAAGGTTGTTCCGTACGTGTGGTATATGGCCTTCGCTACATTTCCCGCTGGAATACTTGAGATCGGGTGTTGGATGTATGCAAGTGAAAGACAGTTAGTAAGGCTAAAACTGGCATATCTAAGAGCAGTCCTTAGCCAAGAGATTGGAGCTTTTGACACTGAATTGACAAATGGAAAAATCATCAATGGAATCAGCAATCACATGAGCCTCATACAAGATGCTATTGGAGAGAAGTTGGGTCACTTCACCTCTTGCTTTGCAACTTTCTTCTCTGGACTTGTGATTGCCGCCATATGCACTTGGGAGGTTGCACTTCTATGTTTATTGGTTGTTCCACTCATTCTTCTGATTGGAGCCACTTACACCAAGAAAATGAACAGCATATATGCTACCAAAATGATTCACCAGTCTGAAGTCACAGCCATGACAGAACAGACTATATCACATATCAAAACGGTATATGCATTTGTGGGGGAGAGCTCTGCACTGAAATCCTTCACAGAGAACATGGACAAACTGTATAGTATAAGCAAAGGAGAGGCACTTATAAAGGGAGTTGGAACAGGAATGTTCCAAACTGTGAGCTTCTGTTGTTGGGCTCTCATTGTATGGGTTGGAGCTGTGGTGGTCACAGCCAAGAGAGCAAGTGGAGGAGACATTATTACTGCAGTCATGAGCATTCTCTTTGGTGCCATATCTTTGACTTATGCTGCACCAGACATGCAAATATTCAATCAGGCAAAAGCAGCAGGGTACGATGTTTTCCAAGTGATCCAAAGAAAGCCACTTATAAGTAATGAGTCACAAGGGAAGACACCTAACAAGATTGAGGGCTCCATTGACATATGTGATGTTTACTTTTCTTACCCGTCACGTCCAGAGAAACCTATCCTTCGAGGGTTTTCGTTGTCAATCCCTGCAGGGAAGACAGTAGCATTAGTTGGTAGCAGTGGGTGTGGAAAGAGTACTGTTATCTCCCTGGTTTCCAGATTTTATGACCCCTCAAAAGGAGAAATTTTCATTGATCACCACAAAATCAAGGATCTTGATCTGAAGTTCCTTCGAAGAAACATAGGAGCTGTTTCACAAGAACCTTCACTCTTTACAGGCACCATCAAGGATAACTTGAAAGTAGGAAAAATGGATGCAGATGATCAAGAAATACAGAATGCAGCAGAAATGTCAAATGCACGTTCTTTCATATCACAGCTTCCTGATCAGTACCTAACAGAGGTAGGACAAAGGGGTGTCCAATTATCAGGAGGCCAAAAACAAATGATAGCAATAGCAAGAGCCATGCTGAAGAATCCTCCCATACTCCTGCTTGATGAGGCTACAAGTGCTCTTGACTCACAGTCAGAAAAGCTGGTTCAAGAAGCTCTTGAGAAAGCTATGAGGGGGAGGACTGTCACCTTGATTGCACACAGGCTGTCAACAGTGGTAAATGCAGATATGATTGTTGTTGTTCAGAACGGACAAGTTTCAGAAACAGGAACGCATAACAGTTTGCTAGAAACAAGCGCATTCTACAGTGCACTAGTCAACATGCAGAACCTTGAACCAGTTCCCGAGTTGAGAACATCAAGCTCCAAAAATGAAATTCCAAGTGTCCACAAAGAAGATTCTTTTGAAGATACTAGACTACAAGAGAAACAAGTAGAGGCCCTTGAAATTCTCTCTGGGCGTTCTGCGCAAGAGGAAAAGAAAAGCAGAAAAGAAAGAAGTATATTTTTCAGAATCTGGTTTGGTCTGAAAAAAAGGGAGTTTGTAAAGACTGCTATTGGTGCCTTTGCAGCAGCTTTCTCAGGTATCTCGAAGCCTGTTTTTGGATTCTTCATCATCACCATTGGAGTAGCATACTTCCATGACAATGCAAAATGGAAGGTCGCTTTGTACTCTGTTATCTTTGCTGGAATAGGGTTAATTTCATTATTCAGTCACACTTTGCAGCATTACTTCTTTGGAGTAATTGGAGAAAAGGCCATGGGAAATCTCAGACGTGCTCTTTATTCAGGTGTGCTTCGCAATGAAGTAGGCTGGTTTGACAAACCTGAGAACAGTGTCGGTTCGCTTACTTCACGCATCATCAGTGACACAACCATGGTCAAAATCATAATTGCTGATCGCATGTCTGTGATTGTGCAATGCATGTCCTCCATACTGATAGCAACAGTGGTCAGCATGGTTGTTAACTGGAGAATGGGTTTGGTAGCTTGGGCCGTGATGCCCTGCCACTTCATAGGCGGTCTGGTTCAAGCCAAGTCTGCCAAAGGATTCTCAGGAGACTACTCTGCTGCACATTCTGATCTTGTTGCTCTGGCATCTGAGTCCACAGCCAACATCAGGACCATTGCATCATTTTGCCATGAAGAGCACGTGCTCAGAAAAGCAAAAACATCCTTGGACATGCCAAAGAAAAAGTACAGGATAGAAAGTATCAAATATGGGATCATTCAAGGCTTCTCCCTTTGCCTATGGAACATAGCACATGCTGTAGCTTTGTGGTACACAACAATTTTGGTCGACAGAGGCCAAGCCTCCTTTGAAAATGGCATAAGATCATACCAGATTTTTTCTCTCACAGTTCCTTCTATCACAGAGCTGTACACACTGATCCCCACTGTCATCTCTGCTATCAACAAACTGACCCCAGCATTCGAGACCCTTGACCGTAAAACTGAAATTGAACCAGATAGACAAGAAGATGAAGCAAATCTTAAGAGGATACAAGGAGATGTTGAATTTCAACATGTGAAGTTCAACTATCCATTGAGACCTGAGGTGGCTGTTCTTGACAATTTTAGTTTAAAAATTGAAGCTGGATCAAAGGTAGCTCTTGTGGGGCCAAGTGGGGCTGGAAAATCCTCTGTATTGGCCCTTCTACTGAGATTCTATGATCCAAGGGAAGGAAAGGTATTCATTGATGGGAAAGACATAAAAGAGTATAACCTAAGATGGTTCAGAACACAAATAGGGCTGGTACAACAAGAGCCACTGCTCTTTAACTGCTCTATAAGAGAGAACATCTGCTATGGCAACAATGAGACTTCTGAAAGTGAAATAGTGGAGGTTTCAAGAGAAGCAAACATACATGAATTTGTGAGCAATCTACCAAATGGGTATGACACTGTTGTTGGAGAAAAAGGATGCCAGCTTTCAGGAGGGCAGAAGCAGAGAATAGCAATAGCCAGAACATTACTGAAGAAACCTGCAATTTTACTGCTTGATGAAGCAACAAGTGCTCTTGATGCTGAGTCTGAAAGAACAGTGATTAGTGCTTTGAAAGCAATAAGTCTGAAGGGAGGGAGAGGGTTGCATGCAGGAACAACCCATATCACAATTGCGCATAGACTTTCCACAATAGTAAACTCAGATACCATAATTGTTATGGAGAAAGGTGAAATTGTGGAGATGGGTTCCCACTCAACCTTGATAGAATCAGAGGCAGGACTTTACTCAAGGCTATTCAGGTTGCAGAGCTTTGAAGAAAACTGA 3780 0.4299 MALSRSQRVVQVDREGDFSDDDDQQQQKKIVAKAFPFLELLSYADAVDWILMGLGTLGSIVHGMALPVGYLLLGKALNAFGNNIGDTDAMVVALKKVVPYVWYMAFATFPAGILEIGCWMYASERQLVRLKLAYLRAVLSQEIGAFDTELTNGKIINGISNHMSLIQDAIGEKLGHFTSCFATFFSGLVIAAICTWEVALLCLLVVPLILLIGATYTKKMNSIYATKMIHQSEVTAMTEQTISHIKTVYAFVGESSALKSFTENMDKLYSISKGEALIKGVGTGMFQTVSFCCWALIVWVGAVVVTAKRASGGDIITAVMSILFGAISLTYAAPDMQIFNQAKAAGYDVFQVIQRKPLISNESQGKTPNKIEGSIDICDVYFSYPSRPEKPILRGFSLSIPAGKTVALVGSSGCGKSTVISLVSRFYDPSKGEIFIDHHKIKDLDLKFLRRNIGAVSQEPSLFTGTIKDNLKVGKMDADDQEIQNAAEMSNARSFISQLPDQYLTEVGQRGVQLSGGQKQMIAIARAMLKNPPILLLDEATSALDSQSEKLVQEALEKAMRGRTVTLIAHRLSTVVNADMIVVVQNGQVSETGTHNSLLETSAFYSALVNMQNLEPVPELRTSSSKNEIPSVHKEDSFEDTRLQEKQVEALEILSGRSAQEEKKSRKERSIFFRIWFGLKKREFVKTAIGAFAAAFSGISKPVFGFFIITIGVAYFHDNAKWKVALYSVIFAGIGLISLFSHTLQHYFFGVIGEKAMGNLRRALYSGVLRNEVGWFDKPENSVGSLTSRIISDTTMVKIIIADRMSVIVQCMSSILIATVVSMVVNWRMGLVAWAVMPCHFIGGLVQAKSAKGFSGDYSAAHSDLVALASESTANIRTIASFCHEEHVLRKAKTSLDMPKKKYRIESIKYGIIQGFSLCLWNIAHAVALWYTTILVDRGQASFENGIRSYQIFSLTVPSITELYTLIPTVISAINKLTPAFETLDRKTEIEPDRQEDEANLKRIQGDVEFQHVKFNYPLRPEVAVLDNFSLKIEAGSKVALVGPSGAGKSSVLALLLRFYDPREGKVFIDGKDIKEYNLRWFRTQIGLVQQEPLLFNCSIRENICYGNNETSESEIVEVSREANIHEFVSNLPNGYDTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLDEATSALDAESERTVISALKAISLKGGRGLHAGTTHITIAHRLSTIVNSDTIIVMEKGEIVEMGSHSTLIESEAGLYSRLFRLQSFEEN 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1805 1259 SUPERFAMILY ABC transporter transmembrane region 40 339 IPR036640 GO:0005524|GO:0016020
Bisa05g1805 1259 Gene3D ABC transporter type 1, transmembrane domain 39 969 IPR036640 GO:0005524|GO:0016020
Bisa05g1805 1259 Gene3D - 998 1259 IPR027417 -
Bisa05g1805 1259 SMART AAA_5 1035 1229 IPR003593 GO:0016887
Bisa05g1805 1259 SMART AAA_5 402 574 IPR003593 GO:0016887
Bisa05g1805 1259 MobiDBLite consensus disorder prediction 1 24 - -
Bisa05g1805 1259 CDD ABC_MTABC3_MDL1_MDL2 375 612 - -
Bisa05g1805 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 612 IPR027417 -
Bisa05g1805 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 54 341 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa05g1805 1259 Pfam ABC transporter transmembrane region 53 326 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa05g1805 1259 Pfam ABC transporter transmembrane region 689 951 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa05g1805 1259 Gene3D - 365 613 IPR027417 -
Bisa05g1805 1259 FunFam ABC transporter B family member 1 998 1255 - -
Bisa05g1805 1259 CDD ABC_6TM_Pgp_ABCB1_D1_like 52 349 - -
Bisa05g1805 1259 MobiDBLite consensus disorder prediction 10 24 - -
Bisa05g1805 1259 SUPERFAMILY ABC transporter transmembrane region 676 992 IPR036640 GO:0005524|GO:0016020
Bisa05g1805 1259 CDD ABC_MTABC3_MDL1_MDL2 1008 1254 - -
Bisa05g1805 1259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 688 972 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa05g1805 1259 FunFam ABC transporter B family member 4 365 619 - -
Bisa05g1805 1259 ProSitePatterns ABC transporters family signature. 514 528 IPR017871 GO:0005524|GO:0016887
Bisa05g1805 1259 CDD ABC_6TM_Pgp_ABCB1_D2_like 677 990 - -
Bisa05g1805 1259 Pfam ABC transporter 1026 1175 IPR003439 GO:0005524
Bisa05g1805 1259 Pfam ABC transporter 394 542 IPR003439 GO:0005524
Bisa05g1805 1259 PANTHER ABC TRANSPORTER B FAMILY 20 611 IPR039421 -
Bisa05g1805 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 375 611 IPR003439 GO:0005524
Bisa05g1805 1259 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1008 1252 IPR003439 GO:0005524
Bisa05g1805 1259 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524|GO:0016887
Bisa05g1805 1259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1254 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1805 Bisa-ChrBisa05 33924823 33931484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1805 25 1256 Calmodulin-binding Proteins AT2G36910 40.523 0.0 947