Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa05g1766 ATGTCCTCATTTTCTTTTCTCCAAAGCAATCCTCATCCATATGGAGGGGCAGTTTTGGAATTAGGCGAGAGCGAAAGACGCCAGAATTCAGGTGGGTTTCCCTGTGGTTACTCTCCGGTGAAAACTGCAGGAGGTCTGCTTTTGCATTTGACGGTTTTCGGATCGAACTCTCTGGAACATTCTTATTCTCTTCTTCAACTTGTTTTCACTTTAAAGCTTCAGAATATCGTCTTCTCTGGAGTGATTTCTAGGTATCCGATAATGCGGGCATTGTTGAACATGAGAGCTCTTGCCTACTTGTTCTTGTTGCTTCTTATAGATCCAGTGGTCGTGGTGATTTCTGTGAACCCGTCTCTCAACGACGACGTTTTGGGGCTGATTGTGTTCAAAGCTGATATACAAGATCCGAAGGGGAAACTGCAGAGTTGGAATGAAGACGACGAGTATCCCTGCGGATGGGTCGGTGTGAAATGCAGCCCTAGATCCAACAGAGTCGTCGAGCTTAACCTTGATGGGTTCTCTCTCTCGGGTCGGATAGGTCGAGGGCTCCTCCAGTTACCATTTTTGCGCAAGCTTTCCCTCACCAAGAACAATCTCACGGGCAGCATAAGCCCCAACATTGCTCTGCTCGACAACCTCCGAGTGATCGATTTGAGCGAGAATAATCTCTCCGGCGAGCTTCCCGACGACCTTTTCCGACAAGGTGGGTCCCTAAGGGCGGTTTCATTAGCGAGGAACAAGTTCACAGGGAAGATTCCTTCTAGCTTGAGCTCGTGCTCGGCTCTTGCTGCAATTAACCTCTCGTTCAACCAGTTTTCCGGTTCTATTCCTTCTGGTATTTGGACTTTGAGTGGACTTAGGTCACTGGATTTGTCGGATAATTTGTTGGAAGGTGAGATTCCGAAGGGAATTGAAGGATTGAAGAATTTGCGAACAATCAACTTGGCCAAAAATCAGTTTTCTGGGGAGGTTCCTGACGGGTTTGGAGGTTGCTCACTTTTGAGGTCTATTGATGTCAGTGAGAATTCTCTTTCTGGAAGCCTTCCAGAAGACTTGAAGGAGCTCACATTGTGTAATTTTCTCAGTGTAAGTGGAAATGGTTTTTCAGGTGAGATTCCTTCGTGGATTGGGGAAATGAAGAGCCTGGAGACATTGGACATATCTATCAATAGATTCTCAGGTCAGGTGCCAAGTTCTATAGGAAATCTTCAGTCCTTGAAGACAATGAATTTTTCTGCAAATGGTCTTTCAGGTAACCTGCCAGAGTCTATGATAAACTGCACAAGCCTTGTAGCCTTGGATATTAGCCAGAATTCAATGTCAGGTGATCTTCCGTCCTGGATTTTCAAGTCAGATTTGCAGAAGGTTTTGGTATCAGAAAACAAATTGCATGGAAGCCCCAAAAACCCACTATATTCCTTGGAGGAAGTTGCAGTTCAAAGTCTTCAAATTTTGGATTTATCTGGGAATGCATTCTCCGGTAAAATTACATCTGATGTCTCAGTTTTAAGCAGCTTGAAGCTCCTGAATTTATCAAAGAACACTCTAACCGGTCCTATACCAGCTGCTATTGGAGAGCTAAAATCACTGAATAGTCTTGATTTGAGTGAGAATCAGCTAAACGGAAGCATACCTTTTGAAATAGGAGGAGCTGTATCTTTGAAAGAATTGAGATTGGCGAAAAACTCTCTTGTGGGGAAGGTCCCAACCTCAATAGACAACTGCTCTTCATTGACGACTTTAATTCTATCGCAGAACAGTCTGAGTGGTTCGATACCTGCAGCAATTGCAAAACTGACTAATCTACAAATTGTGGACTTATCCTTGAACAACCTCACTGGAAACCTCCCAAAGCAATTGGCTAATCTGCCAAACATTCTTTCCTTCAATATGTCTCACAACAACCTTCAGGGTGAACTGCCAGCTGGTCCCTATTTCAATACCATTTCGCCTTCCTATGTTGCTGGCAATCCAGATCTTTGTGGTGCTGCTGTCAAGAAATCATGCCCTTCTGTTCTTCCAAAGCCTATTGTCCTAAATCCGAACACTTCTACTGATTATGCTCCAGGTTCACTCCCTCAGAATTTGGGTCACAAAAGAATCATTCTCAGCATTTCTGCTCTCATTGCCATTGGTGCGGCTGCTGTCATTGTCATTGGTGTCATTGCCATCACTGTTCTCAATCTCCGCGTTCGGTCCTCAGAGTCTCGAGCTCCAGCTGCCCTCACATTTTCTGCAGGGGAAGAATTTAGCCATTCTCCAACTACAGATGCCAACTCTGGCAAGCTTGTCATGTTTTCTGGTGAACCTGACTTCAGCACAGGAGCACATGCTTTGCTTAATAAGGATTGTGAGCTTGGGCGAGGTGGGTTTGGAGCAGTGTACCGAACAGTTCTTAGAGATGGCCATTCAGTTGCAATCAAGAAGCTCACAGTATCAAGTCTTGTTAAGTCCCAGGATGATTTTGAAAGAGAAGTGAAAAAGCTGGGAAAAGTCAGGCACCAAAATCTTGTGGCACTTGAAGGTTATTATTGGACTCCATCCCTACAGCTCCTCATATACGAGTTCATCTCTGGTGGTAGTCTGTATAAGCATCTACATGATGGATCAGGTGGAAACTTCCTCTCGTGGAATGAGAGGTTTAATGTAATACTTGGGACAGCAAAAGCCTTGGCTCATTTGCACCACATGAACATTATTCACTACAACATCAAGTCAACCAATGTCCTAATTGATGGCTATGGTGAAGCTAAAGTGGGTGACTTTGGCCTAGCAAGATTGTTACCAATGCTTGACCGTTATGTCTTAAGCAGCAAAATTCAAAGCGCACTTGGCTACATGGCTCCTGAATTTGCTTGCCGAACCGTGAAGATAACAGAGAAATGTGATGTGTATGGGTTTGGAGTTTTGGTTTTGGAAGTTGTCACAGGAAAGAGGCCTGTCGAATATATGGAGGACGATGTGGTAGTACTTTGTGACATGGTCAGAGGAGCTCTGGAAGAAGGCAGGGTGGAGGAATGCATTGATGGGAGGCTGCAGGGTAAGTTCCCGGCCGAGGAAGCTATTCCAGTGATGAAGCTAGGCTTAATATGTACTTCGCAAGTGCCCTCCAACCGGCCGGACATGGGAGAGGTAGTTAATATACTGGAGCTTATAAGATGTCCCTCAGAAGGACAAGAGGAGCTGGGATGA 3192 0.4496 MSSFSFLQSNPHPYGGAVLELGESERRQNSGGFPCGYSPVKTAGGLLLHLTVFGSNSLEHSYSLLQLVFTLKLQNIVFSGVISRYPIMRALLNMRALAYLFLLLLIDPVVVVISVNPSLNDDVLGLIVFKADIQDPKGKLQSWNEDDEYPCGWVGVKCSPRSNRVVELNLDGFSLSGRIGRGLLQLPFLRKLSLTKNNLTGSISPNIALLDNLRVIDLSENNLSGELPDDLFRQGGSLRAVSLARNKFTGKIPSSLSSCSALAAINLSFNQFSGSIPSGIWTLSGLRSLDLSDNLLEGEIPKGIEGLKNLRTINLAKNQFSGEVPDGFGGCSLLRSIDVSENSLSGSLPEDLKELTLCNFLSVSGNGFSGEIPSWIGEMKSLETLDISINRFSGQVPSSIGNLQSLKTMNFSANGLSGNLPESMINCTSLVALDISQNSMSGDLPSWIFKSDLQKVLVSENKLHGSPKNPLYSLEEVAVQSLQILDLSGNAFSGKITSDVSVLSSLKLLNLSKNTLTGPIPAAIGELKSLNSLDLSENQLNGSIPFEIGGAVSLKELRLAKNSLVGKVPTSIDNCSSLTTLILSQNSLSGSIPAAIAKLTNLQIVDLSLNNLTGNLPKQLANLPNILSFNMSHNNLQGELPAGPYFNTISPSYVAGNPDLCGAAVKKSCPSVLPKPIVLNPNTSTDYAPGSLPQNLGHKRIILSISALIAIGAAAVIVIGVIAITVLNLRVRSSESRAPAALTFSAGEEFSHSPTTDANSGKLVMFSGEPDFSTGAHALLNKDCELGRGGFGAVYRTVLRDGHSVAIKKLTVSSLVKSQDDFEREVKKLGKVRHQNLVALEGYYWTPSLQLLIYEFISGGSLYKHLHDGSGGNFLSWNERFNVILGTAKALAHLHHMNIIHYNIKSTNVLIDGYGEAKVGDFGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEECIDGRLQGKFPAEEAIPVMKLGLICTSQVPSNRPDMGEVVNILELIRCPSEGQEELG 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa05g1766 1063 PRINTS Leucine-rich repeat signature 527 540 - -
Bisa05g1766 1063 PRINTS Leucine-rich repeat signature 213 226 - -
Bisa05g1766 1063 SUPERFAMILY L domain-like 119 447 - -
Bisa05g1766 1063 ProSiteProfiles Protein kinase domain profile. 780 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa05g1766 1063 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 120 398 - -
Bisa05g1766 1063 Gene3D Ribonuclease Inhibitor 380 672 IPR032675 -
Bisa05g1766 1063 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 399 673 - -
Bisa05g1766 1063 Pfam Leucine rich repeat 381 439 IPR001611 GO:0005515
Bisa05g1766 1063 Pfam Leucine rich repeat 212 272 IPR001611 GO:0005515
Bisa05g1766 1063 Pfam Leucine rich repeat 481 540 IPR001611 GO:0005515
Bisa05g1766 1063 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 774 856 - -
Bisa05g1766 1063 Gene3D Phosphorylase Kinase; domain 1 773 856 - -
Bisa05g1766 1063 Gene3D Transferase(Phosphotransferase) domain 1 857 1061 - -
Bisa05g1766 1063 SUPERFAMILY Protein kinase-like (PK-like) 783 1053 IPR011009 -
Bisa05g1766 1063 SUPERFAMILY L domain-like 352 649 - -
Bisa05g1766 1063 Pfam Protein tyrosine and serine/threonine kinase 782 1048 IPR001245 GO:0004672|GO:0006468
Bisa05g1766 1063 ProSitePatterns Protein kinases ATP-binding region signature. 786 809 IPR017441 GO:0005524
Bisa05g1766 1063 SMART LRR_typ_2 210 234 IPR003591 -
Bisa05g1766 1063 SMART LRR_typ_2 379 403 IPR003591 -
Bisa05g1766 1063 SMART LRR_typ_2 283 306 IPR003591 -
Bisa05g1766 1063 SMART LRR_typ_2 307 330 IPR003591 -
Bisa05g1766 1063 SMART LRR_typ_2 599 623 IPR003591 -
Bisa05g1766 1063 SMART LRR_typ_2 527 551 IPR003591 -
Bisa05g1766 1063 SMART LRR_typ_2 471 494 IPR003591 -
Bisa05g1766 1063 Pfam Leucine rich repeat N-terminal domain 120 159 IPR013210 -
Bisa05g1766 1063 Gene3D Ribonuclease Inhibitor 120 277 IPR032675 -
Bisa05g1766 1063 CDD STKc_IRAK 786 1052 - -
Bisa05g1766 1063 Gene3D Ribonuclease Inhibitor 278 375 IPR032675 -
Bisa05g1766 1063 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 857 1058 - -
Bisa05g1766 1063 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 405 1052 - -
Bisa05g1766 1063 Pfam Leucine Rich Repeat 286 307 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa05g1766 Bisa-ChrBisa05 32991986 32999844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa05g1766 98 1063 Receptor kinase-like Gene Family AT3G56370 68.827 0.0 1290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bisa05g1766 PK_Tyr_Ser-Thr 9.5e-41 CL0016